Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Lrrk1Q3UHC2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23,46■■□□□ 1,35
Lrrk1Q3UHC2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Lrrk1Q3UHC2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23,45■■□□□ 1,35
Lrrk1Q3UHC2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23,45■■□□□ 1,35
Lrrk1Q3UHC2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23,45■■□□□ 1,34
Lrrk1Q3UHC2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23,45■■□□□ 1,34
Lrrk1Q3UHC2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23,44■■□□□ 1,34
Lrrk1Q3UHC2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Lrrk1Q3UHC2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23,43■■□□□ 1,34
Lrrk1Q3UHC2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23,43■■□□□ 1,34
Lrrk1Q3UHC2 Gm6345-201ENSMUST00000180378 1691 ntBASIC23,43■■□□□ 1,34
Lrrk1Q3UHC2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23,42■■□□□ 1,34
Lrrk1Q3UHC2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23,41■■□□□ 1,34
Lrrk1Q3UHC2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23,41■■□□□ 1,34
Lrrk1Q3UHC2 AC157572.2-201ENSMUST00000226970 908 ntBASIC23,41■■□□□ 1,34
Lrrk1Q3UHC2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Lrrk1Q3UHC2 Gm5987-201ENSMUST00000196433 1151 ntBASIC23,4■■□□□ 1,34
Lrrk1Q3UHC2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23,4■■□□□ 1,34
Lrrk1Q3UHC2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Lrrk1Q3UHC2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23,39■■□□□ 1,33
Lrrk1Q3UHC2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23,38■■□□□ 1,33
Lrrk1Q3UHC2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23,38■■□□□ 1,33
Lrrk1Q3UHC2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Lrrk1Q3UHC2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23,36■■□□□ 1,33
Lrrk1Q3UHC2 Gm24970-201ENSMUST00000175582 82 ntBASIC23,36■■□□□ 1,33
Lrrk1Q3UHC2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23,34■■□□□ 1,33
Lrrk1Q3UHC2 Gm43863-201ENSMUST00000203822 1192 ntBASIC23,33■■□□□ 1,33
Lrrk1Q3UHC2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23,33■■□□□ 1,33
Lrrk1Q3UHC2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23,33■■□□□ 1,32
Lrrk1Q3UHC2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23,32■■□□□ 1,32
Lrrk1Q3UHC2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Lrrk1Q3UHC2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23,3■■□□□ 1,32
Lrrk1Q3UHC2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23,3■■□□□ 1,32
Lrrk1Q3UHC2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Lrrk1Q3UHC2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Lrrk1Q3UHC2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23,29■■□□□ 1,32
Lrrk1Q3UHC2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23,28■■□□□ 1,32
Lrrk1Q3UHC2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23,27■■□□□ 1,32
Lrrk1Q3UHC2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23,27■■□□□ 1,32
Lrrk1Q3UHC2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23,26■■□□□ 1,31
Lrrk1Q3UHC2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23,26■■□□□ 1,31
Lrrk1Q3UHC2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23,26■■□□□ 1,31
Lrrk1Q3UHC2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Lrrk1Q3UHC2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Lrrk1Q3UHC2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Lrrk1Q3UHC2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23,23■■□□□ 1,31
Lrrk1Q3UHC2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Lrrk1Q3UHC2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23,23■■□□□ 1,31
Lrrk1Q3UHC2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23,22■■□□□ 1,31
Lrrk1Q3UHC2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23,22■■□□□ 1,31
Lrrk1Q3UHC2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23,21■■□□□ 1,31
Lrrk1Q3UHC2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Lrrk1Q3UHC2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23,2■■□□□ 1,31
Lrrk1Q3UHC2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23,2■■□□□ 1,3
Lrrk1Q3UHC2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Lrrk1Q3UHC2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23,19■■□□□ 1,3
Lrrk1Q3UHC2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Lrrk1Q3UHC2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Lrrk1Q3UHC2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23,18■■□□□ 1,3
Lrrk1Q3UHC2 Zxda-201ENSMUST00000117281 2621 ntBASIC23,16■■□□□ 1,3
Lrrk1Q3UHC2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23,16■■□□□ 1,3
Lrrk1Q3UHC2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23,16■■□□□ 1,3
Lrrk1Q3UHC2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23,15■■□□□ 1,3
Lrrk1Q3UHC2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23,15■■□□□ 1,3
Lrrk1Q3UHC2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,15■■□□□ 1,3
Lrrk1Q3UHC2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23,15■■□□□ 1,3
Lrrk1Q3UHC2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23,14■■□□□ 1,3
Lrrk1Q3UHC2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23,14■■□□□ 1,3
Lrrk1Q3UHC2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23,13■■□□□ 1,29
Lrrk1Q3UHC2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23,12■■□□□ 1,29
Lrrk1Q3UHC2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23,12■■□□□ 1,29
Lrrk1Q3UHC2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Lrrk1Q3UHC2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23,12■■□□□ 1,29
Lrrk1Q3UHC2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23,11■■□□□ 1,29
Lrrk1Q3UHC2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23,11■■□□□ 1,29
Lrrk1Q3UHC2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23,1■■□□□ 1,29
Lrrk1Q3UHC2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Lrrk1Q3UHC2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23,1■■□□□ 1,29
Lrrk1Q3UHC2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23,09■■□□□ 1,29
Lrrk1Q3UHC2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23,09■■□□□ 1,29
Lrrk1Q3UHC2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,28
Lrrk1Q3UHC2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23,08■■□□□ 1,28
Lrrk1Q3UHC2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Lrrk1Q3UHC2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Lrrk1Q3UHC2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Lrrk1Q3UHC2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Lrrk1Q3UHC2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Lrrk1Q3UHC2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23,05■■□□□ 1,28
Lrrk1Q3UHC2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23,04■■□□□ 1,28
Lrrk1Q3UHC2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,04■■□□□ 1,28
Lrrk1Q3UHC2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23,04■■□□□ 1,28
Lrrk1Q3UHC2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23,04■■□□□ 1,28
Lrrk1Q3UHC2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Retrieved 100 of 76,532 protein–RNA pairs in 9,8 ms