Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Spg11Q3UHA3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.18■■□□□ 1.46
Spg11Q3UHA3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Spg11Q3UHA3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Spg11Q3UHA3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.16■■□□□ 1.46
Spg11Q3UHA3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Spg11Q3UHA3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Spg11Q3UHA3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Spg11Q3UHA3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.15■■□□□ 1.46
Spg11Q3UHA3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Spg11Q3UHA3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Spg11Q3UHA3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Spg11Q3UHA3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Spg11Q3UHA3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.1■■□□□ 1.45
Spg11Q3UHA3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Spg11Q3UHA3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Spg11Q3UHA3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Spg11Q3UHA3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Spg11Q3UHA3 Gm22567-201ENSMUST00000175542 342 ntBASIC24.08■■□□□ 1.45
Spg11Q3UHA3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Spg11Q3UHA3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Spg11Q3UHA3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Spg11Q3UHA3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.06■■□□□ 1.44
Spg11Q3UHA3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.06■■□□□ 1.44
Spg11Q3UHA3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.06■■□□□ 1.44
Spg11Q3UHA3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Spg11Q3UHA3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Spg11Q3UHA3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Spg11Q3UHA3 Gm6311-201ENSMUST00000073790 878 ntBASIC24.03■■□□□ 1.44
Spg11Q3UHA3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.03■■□□□ 1.44
Spg11Q3UHA3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Spg11Q3UHA3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
Spg11Q3UHA3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Spg11Q3UHA3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.01■■□□□ 1.43
Spg11Q3UHA3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
Spg11Q3UHA3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Spg11Q3UHA3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Spg11Q3UHA3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Spg11Q3UHA3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Spg11Q3UHA3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.96■■□□□ 1.43
Spg11Q3UHA3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Spg11Q3UHA3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.96■■□□□ 1.43
Spg11Q3UHA3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Spg11Q3UHA3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.95■■□□□ 1.42
Spg11Q3UHA3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Spg11Q3UHA3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Spg11Q3UHA3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Spg11Q3UHA3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Spg11Q3UHA3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.93■■□□□ 1.42
Spg11Q3UHA3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Spg11Q3UHA3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Spg11Q3UHA3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Spg11Q3UHA3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Gm12366-201ENSMUST00000121722 873 ntBASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Gm5786-201ENSMUST00000085368 882 ntBASIC23.9■■□□□ 1.42
Spg11Q3UHA3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Spg11Q3UHA3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Spg11Q3UHA3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Spg11Q3UHA3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Spg11Q3UHA3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Spg11Q3UHA3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Spg11Q3UHA3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Spg11Q3UHA3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Spg11Q3UHA3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Spg11Q3UHA3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Spg11Q3UHA3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
Spg11Q3UHA3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Spg11Q3UHA3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Spg11Q3UHA3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.83■■□□□ 1.41
Spg11Q3UHA3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.82■■□□□ 1.4
Spg11Q3UHA3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Spg11Q3UHA3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Spg11Q3UHA3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Spg11Q3UHA3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Spg11Q3UHA3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Spg11Q3UHA3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Spg11Q3UHA3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Spg11Q3UHA3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Spg11Q3UHA3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
Spg11Q3UHA3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Spg11Q3UHA3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Spg11Q3UHA3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Spg11Q3UHA3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Spg11Q3UHA3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Spg11Q3UHA3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Spg11Q3UHA3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Spg11Q3UHA3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Spg11Q3UHA3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Spg11Q3UHA3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Spg11Q3UHA3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Spg11Q3UHA3 Gm5812-201ENSMUST00000061073 957 ntBASIC23.73■■□□□ 1.39
Spg11Q3UHA3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Spg11Q3UHA3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Spg11Q3UHA3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.71■■□□□ 1.39
Spg11Q3UHA3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms