Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rnf180Q3U827 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Rnf180Q3U827 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Rnf180Q3U827 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Rnf180Q3U827 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rnf180Q3U827 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rnf180Q3U827 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rnf180Q3U827 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rnf180Q3U827 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rnf180Q3U827 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rnf180Q3U827 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rnf180Q3U827 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rnf180Q3U827 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.05■■■□□ 2.56
Rnf180Q3U827 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rnf180Q3U827 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.03■■■□□ 2.56
Rnf180Q3U827 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.02■■■□□ 2.56
Rnf180Q3U827 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rnf180Q3U827 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rnf180Q3U827 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.98■■■□□ 2.55
Rnf180Q3U827 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Rnf180Q3U827 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rnf180Q3U827 Gm6311-201ENSMUST00000073790 878 ntBASIC30.95■■■□□ 2.55
Rnf180Q3U827 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Rnf180Q3U827 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
Rnf180Q3U827 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rnf180Q3U827 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.88■■■□□ 2.53
Rnf180Q3U827 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rnf180Q3U827 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Rnf180Q3U827 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rnf180Q3U827 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rnf180Q3U827 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rnf180Q3U827 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rnf180Q3U827 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rnf180Q3U827 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rnf180Q3U827 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.83■■■□□ 2.53
Rnf180Q3U827 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.82■■■□□ 2.52
Rnf180Q3U827 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rnf180Q3U827 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Rnf180Q3U827 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rnf180Q3U827 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
Rnf180Q3U827 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Rnf180Q3U827 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Rnf180Q3U827 Gm22567-201ENSMUST00000175542 342 ntBASIC30.8■■■□□ 2.52
Rnf180Q3U827 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Rnf180Q3U827 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Rnf180Q3U827 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.79■■■□□ 2.52
Rnf180Q3U827 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.78■■■□□ 2.52
Rnf180Q3U827 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rnf180Q3U827 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.77■■■□□ 2.52
Rnf180Q3U827 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.77■■■□□ 2.52
Rnf180Q3U827 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.77■■■□□ 2.52
Rnf180Q3U827 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Rnf180Q3U827 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rnf180Q3U827 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rnf180Q3U827 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rnf180Q3U827 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Rnf180Q3U827 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Rnf180Q3U827 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Rnf180Q3U827 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.72■■■□□ 2.51
Rnf180Q3U827 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rnf180Q3U827 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rnf180Q3U827 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Rnf180Q3U827 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
Rnf180Q3U827 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rnf180Q3U827 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rnf180Q3U827 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.67■■■□□ 2.5
Rnf180Q3U827 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Rnf180Q3U827 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
Rnf180Q3U827 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rnf180Q3U827 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.65■■■□□ 2.5
Rnf180Q3U827 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.64■■■□□ 2.5
Rnf180Q3U827 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.62■■■□□ 2.49
Rnf180Q3U827 Gm12366-201ENSMUST00000121722 873 ntBASIC30.62■■■□□ 2.49
Rnf180Q3U827 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.62■■■□□ 2.49
Rnf180Q3U827 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Rnf180Q3U827 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.62■■■□□ 2.49
Rnf180Q3U827 Gm5786-201ENSMUST00000085368 882 ntBASIC30.62■■■□□ 2.49
Rnf180Q3U827 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Rnf180Q3U827 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rnf180Q3U827 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Rnf180Q3U827 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rnf180Q3U827 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rnf180Q3U827 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rnf180Q3U827 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rnf180Q3U827 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.57■■■□□ 2.49
Rnf180Q3U827 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.57■■■□□ 2.48
Rnf180Q3U827 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Rnf180Q3U827 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.57■■■□□ 2.48
Rnf180Q3U827 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rnf180Q3U827 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rnf180Q3U827 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rnf180Q3U827 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Rnf180Q3U827 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rnf180Q3U827 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rnf180Q3U827 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.52■■■□□ 2.48
Rnf180Q3U827 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.52■■■□□ 2.48
Rnf180Q3U827 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.51■■■□□ 2.47
Rnf180Q3U827 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rnf180Q3U827 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Rnf180Q3U827 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms