Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cln6Q3U466 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Cln6Q3U466 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cln6Q3U466 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cln6Q3U466 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cln6Q3U466 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cln6Q3U466 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cln6Q3U466 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cln6Q3U466 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Cln6Q3U466 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cln6Q3U466 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln6Q3U466 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln6Q3U466 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cln6Q3U466 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cln6Q3U466 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cln6Q3U466 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cln6Q3U466 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln6Q3U466 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln6Q3U466 Gm8109-201ENSMUST00000194076 746 ntBASIC20.76■□□□□ 0.91
Cln6Q3U466 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln6Q3U466 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.76■□□□□ 0.91
Cln6Q3U466 Peli2-204ENSMUST00000226513 1320 ntBASIC20.76■□□□□ 0.91
Cln6Q3U466 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln6Q3U466 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cln6Q3U466 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln6Q3U466 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln6Q3U466 Amer2-203ENSMUST00000225247 2662 ntBASIC20.74■□□□□ 0.91
Cln6Q3U466 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Cln6Q3U466 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.74■□□□□ 0.91
Cln6Q3U466 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cln6Q3U466 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.73■□□□□ 0.91
Cln6Q3U466 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln6Q3U466 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln6Q3U466 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cln6Q3U466 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln6Q3U466 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln6Q3U466 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cln6Q3U466 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cln6Q3U466 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.69■□□□□ 0.9
Cln6Q3U466 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cln6Q3U466 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cln6Q3U466 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cln6Q3U466 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cln6Q3U466 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cln6Q3U466 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.68■□□□□ 0.9
Cln6Q3U466 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cln6Q3U466 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cln6Q3U466 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cln6Q3U466 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cln6Q3U466 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cln6Q3U466 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cln6Q3U466 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cln6Q3U466 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.65■□□□□ 0.9
Cln6Q3U466 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cln6Q3U466 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cln6Q3U466 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cln6Q3U466 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cln6Q3U466 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cln6Q3U466 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cln6Q3U466 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cln6Q3U466 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cln6Q3U466 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cln6Q3U466 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cln6Q3U466 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cln6Q3U466 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cln6Q3U466 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cln6Q3U466 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cln6Q3U466 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cln6Q3U466 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cln6Q3U466 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cln6Q3U466 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Cln6Q3U466 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cln6Q3U466 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cln6Q3U466 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cln6Q3U466 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cln6Q3U466 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.57■□□□□ 0.88
Cln6Q3U466 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cln6Q3U466 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cln6Q3U466 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cln6Q3U466 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cln6Q3U466 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cln6Q3U466 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.55■□□□□ 0.88
Cln6Q3U466 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cln6Q3U466 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cln6Q3U466 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cln6Q3U466 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cln6Q3U466 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cln6Q3U466 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cln6Q3U466 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cln6Q3U466 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Cln6Q3U466 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cln6Q3U466 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cln6Q3U466 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
Cln6Q3U466 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cln6Q3U466 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cln6Q3U466 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cln6Q3U466 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cln6Q3U466 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cln6Q3U466 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cln6Q3U466 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms