Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim6Q3U0I6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim6Q3U0I6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim6Q3U0I6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim6Q3U0I6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim6Q3U0I6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim6Q3U0I6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Smim6Q3U0I6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim6Q3U0I6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim6Q3U0I6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.2■□□□□ 0.66
Smim6Q3U0I6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim6Q3U0I6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim6Q3U0I6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim6Q3U0I6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim6Q3U0I6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim6Q3U0I6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim6Q3U0I6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smim6Q3U0I6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim6Q3U0I6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim6Q3U0I6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smim6Q3U0I6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim6Q3U0I6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Smim6Q3U0I6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim6Q3U0I6 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.13■□□□□ 0.65
Smim6Q3U0I6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim6Q3U0I6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Smim6Q3U0I6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smim6Q3U0I6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.12■□□□□ 0.65
Smim6Q3U0I6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim6Q3U0I6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.11■□□□□ 0.65
Smim6Q3U0I6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim6Q3U0I6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smim6Q3U0I6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smim6Q3U0I6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smim6Q3U0I6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smim6Q3U0I6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim6Q3U0I6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smim6Q3U0I6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.08■□□□□ 0.65
Smim6Q3U0I6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smim6Q3U0I6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smim6Q3U0I6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.08■□□□□ 0.64
Smim6Q3U0I6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.08■□□□□ 0.64
Smim6Q3U0I6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim6Q3U0I6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smim6Q3U0I6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smim6Q3U0I6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim6Q3U0I6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smim6Q3U0I6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Smim6Q3U0I6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim6Q3U0I6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smim6Q3U0I6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim6Q3U0I6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smim6Q3U0I6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.04■□□□□ 0.64
Smim6Q3U0I6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smim6Q3U0I6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim6Q3U0I6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim6Q3U0I6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smim6Q3U0I6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.03■□□□□ 0.64
Smim6Q3U0I6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smim6Q3U0I6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smim6Q3U0I6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smim6Q3U0I6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smim6Q3U0I6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smim6Q3U0I6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Smim6Q3U0I6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smim6Q3U0I6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19■□□□□ 0.63
Smim6Q3U0I6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim6Q3U0I6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Smim6Q3U0I6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim6Q3U0I6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smim6Q3U0I6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim6Q3U0I6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.98■□□□□ 0.63
Smim6Q3U0I6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim6Q3U0I6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim6Q3U0I6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smim6Q3U0I6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smim6Q3U0I6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smim6Q3U0I6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smim6Q3U0I6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smim6Q3U0I6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smim6Q3U0I6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smim6Q3U0I6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smim6Q3U0I6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Smim6Q3U0I6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smim6Q3U0I6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smim6Q3U0I6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Smim6Q3U0I6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smim6Q3U0I6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smim6Q3U0I6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms