Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hspg2Q05793 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hspg2Q05793 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hspg2Q05793 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hspg2Q05793 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hspg2Q05793 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hspg2Q05793 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hspg2Q05793 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hspg2Q05793 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hspg2Q05793 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hspg2Q05793 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hspg2Q05793 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.93■□□□□ 0.62
Hspg2Q05793 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hspg2Q05793 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hspg2Q05793 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hspg2Q05793 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.93■□□□□ 0.62
Hspg2Q05793 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hspg2Q05793 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hspg2Q05793 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hspg2Q05793 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hspg2Q05793 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hspg2Q05793 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hspg2Q05793 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.9■□□□□ 0.62
Hspg2Q05793 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hspg2Q05793 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.89■□□□□ 0.61
Hspg2Q05793 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Hspg2Q05793 Gm11599-201ENSMUST00000118720 878 ntBASIC18.88■□□□□ 0.61
Hspg2Q05793 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hspg2Q05793 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.88■□□□□ 0.61
Hspg2Q05793 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hspg2Q05793 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hspg2Q05793 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hspg2Q05793 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hspg2Q05793 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Hspg2Q05793 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.85■□□□□ 0.61
Hspg2Q05793 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.84■□□□□ 0.61
Hspg2Q05793 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hspg2Q05793 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hspg2Q05793 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.84■□□□□ 0.61
Hspg2Q05793 Nkain2-201ENSMUST00000092602 558 ntBASIC18.84■□□□□ 0.61
Hspg2Q05793 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Hspg2Q05793 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hspg2Q05793 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hspg2Q05793 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hspg2Q05793 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hspg2Q05793 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hspg2Q05793 Gm15039-201ENSMUST00000118914 875 ntBASIC18.82■□□□□ 0.6
Hspg2Q05793 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hspg2Q05793 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hspg2Q05793 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hspg2Q05793 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.8■□□□□ 0.6
Hspg2Q05793 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hspg2Q05793 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hspg2Q05793 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hspg2Q05793 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hspg2Q05793 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hspg2Q05793 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hspg2Q05793 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hspg2Q05793 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hspg2Q05793 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hspg2Q05793 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Hspg2Q05793 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
Hspg2Q05793 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hspg2Q05793 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hspg2Q05793 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hspg2Q05793 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hspg2Q05793 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hspg2Q05793 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hspg2Q05793 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hspg2Q05793 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.73■□□□□ 0.59
Hspg2Q05793 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.73■□□□□ 0.59
Hspg2Q05793 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hspg2Q05793 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hspg2Q05793 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.72■□□□□ 0.59
Hspg2Q05793 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hspg2Q05793 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hspg2Q05793 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hspg2Q05793 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hspg2Q05793 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hspg2Q05793 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hspg2Q05793 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hspg2Q05793 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.67■□□□□ 0.58
Hspg2Q05793 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Hspg2Q05793 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hspg2Q05793 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hspg2Q05793 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hspg2Q05793 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hspg2Q05793 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hspg2Q05793 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Hspg2Q05793 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hspg2Q05793 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hspg2Q05793 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hspg2Q05793 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hspg2Q05793 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.63■□□□□ 0.57
Hspg2Q05793 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hspg2Q05793 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.62■□□□□ 0.57
Hspg2Q05793 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.62■□□□□ 0.57
Hspg2Q05793 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hspg2Q05793 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hspg2Q05793 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms