Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SgcbP82349 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.09■■□□□ 1.13
SgcbP82349 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.09■■□□□ 1.13
SgcbP82349 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SgcbP82349 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SgcbP82349 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SgcbP82349 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SgcbP82349 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.07■■□□□ 1.12
SgcbP82349 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SgcbP82349 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SgcbP82349 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SgcbP82349 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SgcbP82349 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.06■■□□□ 1.12
SgcbP82349 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SgcbP82349 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SgcbP82349 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SgcbP82349 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SgcbP82349 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.04■■□□□ 1.12
SgcbP82349 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SgcbP82349 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SgcbP82349 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.03■■□□□ 1.12
SgcbP82349 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SgcbP82349 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SgcbP82349 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.02■■□□□ 1.12
SgcbP82349 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SgcbP82349 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SgcbP82349 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SgcbP82349 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SgcbP82349 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.99■■□□□ 1.11
SgcbP82349 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SgcbP82349 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SgcbP82349 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SgcbP82349 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SgcbP82349 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SgcbP82349 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.97■■□□□ 1.11
SgcbP82349 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SgcbP82349 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SgcbP82349 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.96■■□□□ 1.11
SgcbP82349 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SgcbP82349 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SgcbP82349 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SgcbP82349 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SgcbP82349 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.95■■□□□ 1.1
SgcbP82349 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SgcbP82349 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SgcbP82349 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SgcbP82349 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SgcbP82349 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.93■■□□□ 1.1
SgcbP82349 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SgcbP82349 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SgcbP82349 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SgcbP82349 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SgcbP82349 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SgcbP82349 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SgcbP82349 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SgcbP82349 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.91■■□□□ 1.1
SgcbP82349 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SgcbP82349 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.9■■□□□ 1.1
SgcbP82349 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SgcbP82349 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SgcbP82349 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SgcbP82349 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.87■■□□□ 1.09
SgcbP82349 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SgcbP82349 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SgcbP82349 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SgcbP82349 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SgcbP82349 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SgcbP82349 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.83■■□□□ 1.09
SgcbP82349 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SgcbP82349 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SgcbP82349 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SgcbP82349 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SgcbP82349 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SgcbP82349 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SgcbP82349 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SgcbP82349 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SgcbP82349 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SgcbP82349 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SgcbP82349 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SgcbP82349 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SgcbP82349 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SgcbP82349 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.76■■□□□ 1.07
SgcbP82349 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.76■■□□□ 1.07
SgcbP82349 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SgcbP82349 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.74■■□□□ 1.07
SgcbP82349 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.74■■□□□ 1.07
SgcbP82349 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SgcbP82349 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SgcbP82349 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.73■■□□□ 1.07
SgcbP82349 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SgcbP82349 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SgcbP82349 Zxda-201ENSMUST00000117281 2621 ntBASIC21.71■■□□□ 1.07
SgcbP82349 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SgcbP82349 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SgcbP82349 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SgcbP82349 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.67■■□□□ 1.06
SgcbP82349 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SgcbP82349 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SgcbP82349 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SgcbP82349 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 677 ms