Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4P63054 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcp4P63054 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcp4P63054 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcp4P63054 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcp4P63054 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcp4P63054 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcp4P63054 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcp4P63054 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcp4P63054 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcp4P63054 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcp4P63054 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcp4P63054 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcp4P63054 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcp4P63054 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcp4P63054 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcp4P63054 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcp4P63054 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcp4P63054 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcp4P63054 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcp4P63054 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcp4P63054 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcp4P63054 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcp4P63054 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcp4P63054 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcp4P63054 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcp4P63054 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Pcp4P63054 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcp4P63054 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcp4P63054 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcp4P63054 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcp4P63054 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcp4P63054 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcp4P63054 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcp4P63054 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcp4P63054 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcp4P63054 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcp4P63054 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcp4P63054 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcp4P63054 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcp4P63054 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcp4P63054 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcp4P63054 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcp4P63054 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcp4P63054 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcp4P63054 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcp4P63054 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcp4P63054 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Pcp4P63054 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcp4P63054 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcp4P63054 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcp4P63054 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcp4P63054 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcp4P63054 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcp4P63054 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcp4P63054 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcp4P63054 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Pcp4P63054 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcp4P63054 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcp4P63054 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcp4P63054 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcp4P63054 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcp4P63054 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Pcp4P63054 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcp4P63054 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcp4P63054 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcp4P63054 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcp4P63054 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcp4P63054 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.87■□□□□ 0.29
Pcp4P63054 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcp4P63054 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcp4P63054 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcp4P63054 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcp4P63054 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcp4P63054 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcp4P63054 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcp4P63054 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcp4P63054 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcp4P63054 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcp4P63054 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcp4P63054 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcp4P63054 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcp4P63054 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Pcp4P63054 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcp4P63054 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcp4P63054 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcp4P63054 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcp4P63054 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcp4P63054 Amer2-203ENSMUST00000225247 2662 ntBASIC16.8■□□□□ 0.28
Pcp4P63054 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcp4P63054 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcp4P63054 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcp4P63054 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcp4P63054 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcp4P63054 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms