Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.35■■□□□ 1.81
Sox1P53783 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.35■■□□□ 1.81
Sox1P53783 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sox1P53783 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sox1P53783 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sox1P53783 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sox1P53783 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sox1P53783 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Sox1P53783 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Sox1P53783 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox1P53783 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Sox1P53783 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sox1P53783 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sox1P53783 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
Sox1P53783 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.19■■□□□ 1.78
Sox1P53783 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sox1P53783 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Sox1P53783 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Sox1P53783 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sox1P53783 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sox1P53783 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Sox1P53783 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Sox1P53783 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sox1P53783 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sox1P53783 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.14■■□□□ 1.78
Sox1P53783 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Sox1P53783 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sox1P53783 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sox1P53783 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sox1P53783 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
Sox1P53783 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.12■■□□□ 1.77
Sox1P53783 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sox1P53783 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Sox1P53783 Gm6311-201ENSMUST00000073790 878 ntBASIC26.11■■□□□ 1.77
Sox1P53783 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Sox1P53783 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sox1P53783 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Sox1P53783 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sox1P53783 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
Sox1P53783 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.05■■□□□ 1.76
Sox1P53783 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sox1P53783 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.05■■□□□ 1.76
Sox1P53783 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Sox1P53783 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.03■■□□□ 1.76
Sox1P53783 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Sox1P53783 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sox1P53783 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sox1P53783 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sox1P53783 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Sox1P53783 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.01■■□□□ 1.75
Sox1P53783 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sox1P53783 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sox1P53783 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26■■□□□ 1.75
Sox1P53783 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sox1P53783 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Sox1P53783 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sox1P53783 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.97■■□□□ 1.75
Sox1P53783 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.97■■□□□ 1.75
Sox1P53783 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sox1P53783 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.96■■□□□ 1.75
Sox1P53783 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sox1P53783 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Sox1P53783 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Sox1P53783 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Sox1P53783 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Sox1P53783 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Sox1P53783 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sox1P53783 Gm22567-201ENSMUST00000175542 342 ntBASIC25.94■■□□□ 1.74
Sox1P53783 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sox1P53783 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sox1P53783 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.92■■□□□ 1.74
Sox1P53783 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Sox1P53783 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.91■■□□□ 1.74
Sox1P53783 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.91■■□□□ 1.74
Sox1P53783 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Sox1P53783 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Sox1P53783 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sox1P53783 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Sox1P53783 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sox1P53783 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.87■■□□□ 1.73
Sox1P53783 Gm12366-201ENSMUST00000121722 873 ntBASIC25.87■■□□□ 1.73
Sox1P53783 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.87■■□□□ 1.73
Sox1P53783 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sox1P53783 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.87■■□□□ 1.73
Sox1P53783 Gm5786-201ENSMUST00000085368 882 ntBASIC25.87■■□□□ 1.73
Sox1P53783 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Sox1P53783 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Sox1P53783 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sox1P53783 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sox1P53783 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Sox1P53783 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sox1P53783 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sox1P53783 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sox1P53783 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
Sox1P53783 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Sox1P53783 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sox1P53783 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sox1P53783 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sox1P53783 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.82■■□□□ 1.72
Sox1P53783 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms