Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.66■□□□□ 0.9
Lhx4P53776 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx4P53776 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lhx4P53776 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Lhx4P53776 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx4P53776 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx4P53776 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.63■□□□□ 0.89
Lhx4P53776 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Lhx4P53776 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx4P53776 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx4P53776 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx4P53776 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx4P53776 Gm9397-201ENSMUST00000200125 605 ntBASIC20.62■□□□□ 0.89
Lhx4P53776 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.62■□□□□ 0.89
Lhx4P53776 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx4P53776 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Lhx4P53776 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx4P53776 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx4P53776 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lhx4P53776 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.6■□□□□ 0.89
Lhx4P53776 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx4P53776 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx4P53776 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.59■□□□□ 0.89
Lhx4P53776 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.59■□□□□ 0.89
Lhx4P53776 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx4P53776 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx4P53776 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx4P53776 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Lhx4P53776 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx4P53776 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx4P53776 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx4P53776 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx4P53776 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx4P53776 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx4P53776 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx4P53776 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx4P53776 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx4P53776 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx4P53776 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lhx4P53776 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Lhx4P53776 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx4P53776 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.53■□□□□ 0.88
Lhx4P53776 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.53■□□□□ 0.88
Lhx4P53776 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx4P53776 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Lhx4P53776 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx4P53776 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx4P53776 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx4P53776 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx4P53776 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx4P53776 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx4P53776 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lhx4P53776 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx4P53776 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.5■□□□□ 0.87
Lhx4P53776 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx4P53776 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx4P53776 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx4P53776 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx4P53776 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Lhx4P53776 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx4P53776 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx4P53776 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx4P53776 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.46■□□□□ 0.87
Lhx4P53776 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.45■□□□□ 0.86
Lhx4P53776 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx4P53776 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Lhx4P53776 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.44■□□□□ 0.86
Lhx4P53776 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx4P53776 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx4P53776 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx4P53776 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx4P53776 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx4P53776 Gm24970-201ENSMUST00000175582 82 ntBASIC20.42■□□□□ 0.86
Lhx4P53776 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.42■□□□□ 0.86
Lhx4P53776 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx4P53776 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx4P53776 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx4P53776 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx4P53776 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx4P53776 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx4P53776 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx4P53776 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx4P53776 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx4P53776 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lhx4P53776 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx4P53776 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx4P53776 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx4P53776 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lhx4P53776 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lhx4P53776 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx4P53776 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx4P53776 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx4P53776 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lhx4P53776 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lhx4P53776 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx4P53776 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx4P53776 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx4P53776 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.35■□□□□ 0.85
Lhx4P53776 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx4P53776 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms