Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nek1P51954 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Nek1P51954 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nek1P51954 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Nek1P51954 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Nek1P51954 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
Nek1P51954 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Nek1P51954 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Nek1P51954 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.65■■■□□ 2.02
Nek1P51954 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Nek1P51954 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Nek1P51954 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.64■■■□□ 2.02
Nek1P51954 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Nek1P51954 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Nek1P51954 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Nek1P51954 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Nek1P51954 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.59■■■□□ 2.01
Nek1P51954 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Nek1P51954 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.58■■■□□ 2.01
Nek1P51954 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.58■■■□□ 2.01
Nek1P51954 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Nek1P51954 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Nek1P51954 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
Nek1P51954 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.56■■■□□ 2
Nek1P51954 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Nek1P51954 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Nek1P51954 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.54■■■□□ 2
Nek1P51954 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.54■■■□□ 2
Nek1P51954 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.53■■■□□ 2
Nek1P51954 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.53■■■□□ 2
Nek1P51954 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.53■■■□□ 2
Nek1P51954 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.53■■■□□ 2
Nek1P51954 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.52■■■□□ 2
Nek1P51954 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.52■■■□□ 2
Nek1P51954 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.52■■■□□ 2
Nek1P51954 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Nek1P51954 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.52■■■□□ 2
Nek1P51954 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.5■■□□□ 1.99
Nek1P51954 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Nek1P51954 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Nek1P51954 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Nek1P51954 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nek1P51954 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nek1P51954 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Nek1P51954 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Nek1P51954 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Nek1P51954 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.44■■□□□ 1.98
Nek1P51954 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Nek1P51954 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Nek1P51954 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Nek1P51954 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Nek1P51954 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.41■■□□□ 1.98
Nek1P51954 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.4■■□□□ 1.98
Nek1P51954 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Nek1P51954 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Nek1P51954 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Nek1P51954 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
Nek1P51954 Gm45855-201ENSMUST00000212546 880 ntBASIC27.38■■□□□ 1.97
Nek1P51954 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Nek1P51954 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Nek1P51954 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.34■■□□□ 1.97
Nek1P51954 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Nek1P51954 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Nek1P51954 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Nek1P51954 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.32■■□□□ 1.96
Nek1P51954 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Nek1P51954 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Nek1P51954 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Nek1P51954 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
Nek1P51954 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Nek1P51954 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Nek1P51954 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nek1P51954 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nek1P51954 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Nek1P51954 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Nek1P51954 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Nek1P51954 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Nek1P51954 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Nek1P51954 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Nek1P51954 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Nek1P51954 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Nek1P51954 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nek1P51954 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Nek1P51954 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Nek1P51954 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nek1P51954 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Nek1P51954 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Nek1P51954 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nek1P51954 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nek1P51954 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nek1P51954 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Nek1P51954 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Nek1P51954 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Nek1P51954 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Nek1P51954 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Nek1P51954 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Nek1P51954 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.15■■□□□ 1.94
Nek1P51954 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Nek1P51954 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Nek1P51954 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms