Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Hnf4aP49698 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hnf4aP49698 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.88■■□□□ 1.41
Hnf4aP49698 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hnf4aP49698 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hnf4aP49698 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hnf4aP49698 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hnf4aP49698 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hnf4aP49698 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hnf4aP49698 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.86■■□□□ 1.41
Hnf4aP49698 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hnf4aP49698 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hnf4aP49698 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.84■■□□□ 1.41
Hnf4aP49698 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hnf4aP49698 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hnf4aP49698 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.83■■□□□ 1.41
Hnf4aP49698 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hnf4aP49698 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hnf4aP49698 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
Hnf4aP49698 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hnf4aP49698 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hnf4aP49698 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hnf4aP49698 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Hnf4aP49698 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hnf4aP49698 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hnf4aP49698 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hnf4aP49698 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hnf4aP49698 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hnf4aP49698 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hnf4aP49698 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hnf4aP49698 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.76■■□□□ 1.39
Hnf4aP49698 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.76■■□□□ 1.39
Hnf4aP49698 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hnf4aP49698 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hnf4aP49698 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hnf4aP49698 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Hnf4aP49698 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hnf4aP49698 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hnf4aP49698 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hnf4aP49698 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.72■■□□□ 1.39
Hnf4aP49698 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hnf4aP49698 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
Hnf4aP49698 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hnf4aP49698 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.71■■□□□ 1.39
Hnf4aP49698 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hnf4aP49698 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hnf4aP49698 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hnf4aP49698 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hnf4aP49698 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hnf4aP49698 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hnf4aP49698 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hnf4aP49698 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hnf4aP49698 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Hnf4aP49698 Amer2-203ENSMUST00000225247 2662 ntBASIC23.65■■□□□ 1.38
Hnf4aP49698 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hnf4aP49698 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.62■■□□□ 1.37
Hnf4aP49698 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hnf4aP49698 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Hnf4aP49698 Zfp131-205ENSMUST00000223812 663 ntBASIC23.61■■□□□ 1.37
Hnf4aP49698 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Hnf4aP49698 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hnf4aP49698 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hnf4aP49698 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Hnf4aP49698 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hnf4aP49698 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Hnf4aP49698 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hnf4aP49698 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.58■■□□□ 1.37
Hnf4aP49698 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Hnf4aP49698 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hnf4aP49698 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hnf4aP49698 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.56■■□□□ 1.36
Hnf4aP49698 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.56■■□□□ 1.36
Hnf4aP49698 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hnf4aP49698 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hnf4aP49698 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hnf4aP49698 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.54■■□□□ 1.36
Hnf4aP49698 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hnf4aP49698 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.53■■□□□ 1.36
Hnf4aP49698 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hnf4aP49698 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hnf4aP49698 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hnf4aP49698 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.52■■□□□ 1.36
Hnf4aP49698 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Hnf4aP49698 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.51■■□□□ 1.35
Hnf4aP49698 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hnf4aP49698 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Hnf4aP49698 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hnf4aP49698 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Hnf4aP49698 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hnf4aP49698 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hnf4aP49698 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Hnf4aP49698 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hnf4aP49698 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hnf4aP49698 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.48■■□□□ 1.35
Hnf4aP49698 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hnf4aP49698 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.48■■□□□ 1.35
Hnf4aP49698 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hnf4aP49698 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hnf4aP49698 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hnf4aP49698 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms