Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rph3aP47708 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.8■■□□□ 1.4
Rph3aP47708 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rph3aP47708 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rph3aP47708 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.79■■□□□ 1.4
Rph3aP47708 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rph3aP47708 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rph3aP47708 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rph3aP47708 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rph3aP47708 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rph3aP47708 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rph3aP47708 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rph3aP47708 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.71■■□□□ 1.39
Rph3aP47708 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rph3aP47708 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rph3aP47708 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rph3aP47708 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rph3aP47708 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rph3aP47708 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rph3aP47708 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rph3aP47708 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rph3aP47708 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.68■■□□□ 1.38
Rph3aP47708 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rph3aP47708 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rph3aP47708 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rph3aP47708 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rph3aP47708 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rph3aP47708 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rph3aP47708 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.65■■□□□ 1.38
Rph3aP47708 Gm9397-201ENSMUST00000200125 605 ntBASIC23.65■■□□□ 1.38
Rph3aP47708 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.38
Rph3aP47708 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Rph3aP47708 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rph3aP47708 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rph3aP47708 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rph3aP47708 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rph3aP47708 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rph3aP47708 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rph3aP47708 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rph3aP47708 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rph3aP47708 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rph3aP47708 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rph3aP47708 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rph3aP47708 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rph3aP47708 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
Rph3aP47708 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rph3aP47708 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Rph3aP47708 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rph3aP47708 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.57■■□□□ 1.36
Rph3aP47708 Gm45855-201ENSMUST00000212546 880 ntBASIC23.57■■□□□ 1.36
Rph3aP47708 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.56■■□□□ 1.36
Rph3aP47708 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.56■■□□□ 1.36
Rph3aP47708 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rph3aP47708 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rph3aP47708 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.55■■□□□ 1.36
Rph3aP47708 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rph3aP47708 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rph3aP47708 Amer2-203ENSMUST00000225247 2662 ntBASIC23.53■■□□□ 1.36
Rph3aP47708 Gm24970-201ENSMUST00000175582 82 ntBASIC23.53■■□□□ 1.36
Rph3aP47708 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rph3aP47708 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rph3aP47708 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rph3aP47708 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.52■■□□□ 1.36
Rph3aP47708 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.52■■□□□ 1.36
Rph3aP47708 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rph3aP47708 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Rph3aP47708 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.5■■□□□ 1.35
Rph3aP47708 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.49■■□□□ 1.35
Rph3aP47708 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rph3aP47708 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rph3aP47708 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rph3aP47708 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.48■■□□□ 1.35
Rph3aP47708 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rph3aP47708 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rph3aP47708 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Rph3aP47708 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rph3aP47708 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rph3aP47708 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rph3aP47708 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rph3aP47708 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.45■■□□□ 1.35
Rph3aP47708 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.44■■□□□ 1.34
Rph3aP47708 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rph3aP47708 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rph3aP47708 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rph3aP47708 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.42■■□□□ 1.34
Rph3aP47708 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rph3aP47708 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rph3aP47708 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.42■■□□□ 1.34
Rph3aP47708 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.41■■□□□ 1.34
Rph3aP47708 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rph3aP47708 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rph3aP47708 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rph3aP47708 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.4■■□□□ 1.34
Rph3aP47708 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.4■■□□□ 1.34
Rph3aP47708 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
Rph3aP47708 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rph3aP47708 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rph3aP47708 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rph3aP47708 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rph3aP47708 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms