Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Hist1h1aP43275 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h1aP43275 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h1aP43275 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h1aP43275 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h1aP43275 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1aP43275 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1aP43275 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.13■□□□□ 0.81
Hist1h1aP43275 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h1aP43275 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hist1h1aP43275 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hist1h1aP43275 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h1aP43275 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hist1h1aP43275 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1aP43275 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1aP43275 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1aP43275 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1aP43275 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1aP43275 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1aP43275 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1aP43275 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h1aP43275 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hist1h1aP43275 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h1aP43275 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h1aP43275 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h1aP43275 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h1aP43275 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h1aP43275 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hist1h1aP43275 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h1aP43275 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h1aP43275 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h1aP43275 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h1aP43275 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1aP43275 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1aP43275 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.05■□□□□ 0.8
Hist1h1aP43275 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Hist1h1aP43275 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1aP43275 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1aP43275 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1aP43275 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.04■□□□□ 0.8
Hist1h1aP43275 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1aP43275 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h1aP43275 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hist1h1aP43275 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.03■□□□□ 0.8
Hist1h1aP43275 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hist1h1aP43275 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h1aP43275 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hist1h1aP43275 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h1aP43275 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h1aP43275 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h1aP43275 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.01■□□□□ 0.79
Hist1h1aP43275 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h1aP43275 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1aP43275 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1aP43275 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1aP43275 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1aP43275 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1aP43275 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1aP43275 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.99■□□□□ 0.79
Hist1h1aP43275 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h1aP43275 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.98■□□□□ 0.79
Hist1h1aP43275 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h1aP43275 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h1aP43275 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.94■□□□□ 0.78
Hist1h1aP43275 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h1aP43275 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1aP43275 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1aP43275 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hist1h1aP43275 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hist1h1aP43275 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1aP43275 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hist1h1aP43275 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1aP43275 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1aP43275 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hist1h1aP43275 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h1aP43275 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
Hist1h1aP43275 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h1aP43275 Gm24804-201ENSMUST00000174982 85 ntBASIC19.9■□□□□ 0.78
Hist1h1aP43275 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h1aP43275 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h1aP43275 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.89■□□□□ 0.77
Hist1h1aP43275 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h1aP43275 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h1aP43275 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h1aP43275 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h1aP43275 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h1aP43275 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Hist1h1aP43275 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h1aP43275 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h1aP43275 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h1aP43275 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h1aP43275 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h1aP43275 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h1aP43275 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hist1h1aP43275 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h1aP43275 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hist1h1aP43275 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h1aP43275 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h1aP43275 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h1aP43275 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms