Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab5cP35278 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab5cP35278 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab5cP35278 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab5cP35278 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rab5cP35278 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Rab5cP35278 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab5cP35278 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab5cP35278 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab5cP35278 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab5cP35278 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab5cP35278 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab5cP35278 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab5cP35278 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rab5cP35278 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab5cP35278 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab5cP35278 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rab5cP35278 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab5cP35278 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.01■□□□□ 0.79
Rab5cP35278 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rab5cP35278 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rab5cP35278 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rab5cP35278 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20■□□□□ 0.79
Rab5cP35278 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rab5cP35278 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab5cP35278 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab5cP35278 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab5cP35278 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab5cP35278 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab5cP35278 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab5cP35278 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab5cP35278 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab5cP35278 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab5cP35278 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Rab5cP35278 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab5cP35278 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab5cP35278 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rab5cP35278 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab5cP35278 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab5cP35278 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab5cP35278 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rab5cP35278 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab5cP35278 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab5cP35278 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Rab5cP35278 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab5cP35278 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab5cP35278 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab5cP35278 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab5cP35278 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab5cP35278 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.89■□□□□ 0.77
Rab5cP35278 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rab5cP35278 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab5cP35278 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab5cP35278 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rab5cP35278 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab5cP35278 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab5cP35278 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab5cP35278 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab5cP35278 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab5cP35278 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab5cP35278 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab5cP35278 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rab5cP35278 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Rab5cP35278 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rab5cP35278 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rab5cP35278 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab5cP35278 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rab5cP35278 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab5cP35278 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab5cP35278 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rab5cP35278 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab5cP35278 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Rab5cP35278 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab5cP35278 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab5cP35278 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rab5cP35278 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rab5cP35278 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.79■□□□□ 0.76
Rab5cP35278 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab5cP35278 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab5cP35278 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab5cP35278 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab5cP35278 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab5cP35278 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Rab5cP35278 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab5cP35278 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab5cP35278 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab5cP35278 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab5cP35278 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Rab5cP35278 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab5cP35278 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab5cP35278 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.74■□□□□ 0.75
Rab5cP35278 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Rab5cP35278 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab5cP35278 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab5cP35278 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rab5cP35278 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab5cP35278 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rab5cP35278 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab5cP35278 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab5cP35278 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms