Protein–RNA interactions for Protein: P06748
Retrieved 8 of 408 protein–RNA pairs in 6.1 ms
NPM1, Nucleophosmin, human
Known RBP eCLIP
Length 294 aa.
Protein | RNA | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Gene | UniProt Accession | Transcript Symbol | Ensembl Transcript ID | Length | Transcript Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
NPM1 | P06748 | FDPS-219 | ENST00000495308 | 808 nt | TSL 2 | 22.14 | ■■□□□ 1.13 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-204 | ENST00000461507 | 1022 nt | TSL 2 | 21.66 | ■■□□□ 1.06 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-207 | ENST00000468479 | 938 nt | TSL 2 | 21.57 | ■■□□□ 1.04 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-220 | ENST00000611010 | 1196 nt | TSL 5 BASIC | 20.96 | ■□□□□ 0.95 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-206 | ENST00000467076 | 1178 nt | APPRIS ALT1 TSL 3 BASIC | 20.95 | ■□□□□ 0.94 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-211 | ENST00000477057 | 741 nt | TSL 2 | 20.75 | ■□□□□ 0.91 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | FDPS-209 | ENST00000471117 | 630 nt | TSL 3 | 14.13 | □□□□□ -0.15 | 3e-6 | ■□□□□ 8.1 |
NPM1 | P06748 | RNU6-9-201 | ENST00000384776 | 107 nt | BASIC | 7.57 | □□□□□ -1.2 | 1e-20 | ■□□□□ 8.1 |