Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.11■□□□□ 0.97
H3f3cP02301 Gm9397-201ENSMUST00000200125 605 ntBASIC21.11■□□□□ 0.97
H3f3cP02301 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3f3cP02301 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3cP02301 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
H3f3cP02301 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3cP02301 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H3f3cP02301 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H3f3cP02301 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
H3f3cP02301 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3f3cP02301 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3f3cP02301 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3f3cP02301 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3cP02301 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3cP02301 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3cP02301 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3cP02301 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3cP02301 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
H3f3cP02301 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
H3f3cP02301 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3f3cP02301 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3f3cP02301 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3f3cP02301 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3f3cP02301 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3f3cP02301 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.02■□□□□ 0.96
H3f3cP02301 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
H3f3cP02301 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
H3f3cP02301 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H3f3cP02301 Gm45855-201ENSMUST00000212546 880 ntBASIC21.01■□□□□ 0.95
H3f3cP02301 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3f3cP02301 Gm24970-201ENSMUST00000175582 82 ntBASIC21■□□□□ 0.95
H3f3cP02301 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21■□□□□ 0.95
H3f3cP02301 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.99■□□□□ 0.95
H3f3cP02301 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H3f3cP02301 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H3f3cP02301 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H3f3cP02301 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H3f3cP02301 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3f3cP02301 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3f3cP02301 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.97■□□□□ 0.95
H3f3cP02301 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H3f3cP02301 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
H3f3cP02301 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
H3f3cP02301 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
H3f3cP02301 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
H3f3cP02301 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3f3cP02301 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.94■□□□□ 0.94
H3f3cP02301 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H3f3cP02301 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3f3cP02301 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3f3cP02301 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3f3cP02301 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3f3cP02301 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3f3cP02301 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
H3f3cP02301 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3f3cP02301 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
H3f3cP02301 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3f3cP02301 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3f3cP02301 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
H3f3cP02301 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
H3f3cP02301 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
H3f3cP02301 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.88■□□□□ 0.93
H3f3cP02301 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3f3cP02301 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H3f3cP02301 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.87■□□□□ 0.93
H3f3cP02301 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.87■□□□□ 0.93
H3f3cP02301 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
H3f3cP02301 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3f3cP02301 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3f3cP02301 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.86■□□□□ 0.93
H3f3cP02301 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H3f3cP02301 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3f3cP02301 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H3f3cP02301 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3f3cP02301 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3f3cP02301 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3f3cP02301 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
H3f3cP02301 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.83■□□□□ 0.93
H3f3cP02301 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.83■□□□□ 0.93
H3f3cP02301 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3f3cP02301 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
H3f3cP02301 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3f3cP02301 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.81■□□□□ 0.92
H3f3cP02301 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3f3cP02301 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.81■□□□□ 0.92
H3f3cP02301 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.8■□□□□ 0.92
H3f3cP02301 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.8■□□□□ 0.92
H3f3cP02301 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3f3cP02301 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
H3f3cP02301 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
H3f3cP02301 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.78■□□□□ 0.92
H3f3cP02301 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3f3cP02301 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3f3cP02301 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
H3f3cP02301 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3f3cP02301 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
H3f3cP02301 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
H3f3cP02301 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.76■□□□□ 0.91
H3f3cP02301 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3f3cP02301 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms