Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.92■■■□□ 2.06
Becn1O88597 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Becn1O88597 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Becn1O88597 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.92■■■□□ 2.06
Becn1O88597 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Becn1O88597 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Becn1O88597 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.9■■■□□ 2.06
Becn1O88597 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Becn1O88597 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Becn1O88597 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.88■■■□□ 2.05
Becn1O88597 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Becn1O88597 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Becn1O88597 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Becn1O88597 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Becn1O88597 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Becn1O88597 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Becn1O88597 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Becn1O88597 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Becn1O88597 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Becn1O88597 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Becn1O88597 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Becn1O88597 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Becn1O88597 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Becn1O88597 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Becn1O88597 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Becn1O88597 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Becn1O88597 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Becn1O88597 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.74■■■□□ 2.03
Becn1O88597 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Becn1O88597 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
Becn1O88597 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Becn1O88597 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Becn1O88597 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Becn1O88597 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Becn1O88597 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Becn1O88597 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Becn1O88597 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.71■■■□□ 2.03
Becn1O88597 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.02
Becn1O88597 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Becn1O88597 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.69■■■□□ 2.02
Becn1O88597 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Becn1O88597 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Becn1O88597 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Becn1O88597 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Becn1O88597 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Becn1O88597 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Becn1O88597 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Becn1O88597 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Becn1O88597 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.66■■■□□ 2.02
Becn1O88597 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Becn1O88597 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Becn1O88597 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Becn1O88597 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Becn1O88597 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
Becn1O88597 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
Becn1O88597 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Becn1O88597 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Becn1O88597 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.58■■■□□ 2.01
Becn1O88597 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.57■■■□□ 2
Becn1O88597 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.57■■■□□ 2
Becn1O88597 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Becn1O88597 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
Becn1O88597 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.55■■■□□ 2
Becn1O88597 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Becn1O88597 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Becn1O88597 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Becn1O88597 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Becn1O88597 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Becn1O88597 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Becn1O88597 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Becn1O88597 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Becn1O88597 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Becn1O88597 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Becn1O88597 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Becn1O88597 Mipep-204ENSMUST00000225043 1548 ntBASIC27.51■■□□□ 1.99
Becn1O88597 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Becn1O88597 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Becn1O88597 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
Becn1O88597 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Becn1O88597 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Becn1O88597 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Becn1O88597 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.48■■□□□ 1.99
Becn1O88597 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.47■■□□□ 1.99
Becn1O88597 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Becn1O88597 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Becn1O88597 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Becn1O88597 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Becn1O88597 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Becn1O88597 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Becn1O88597 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Becn1O88597 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Becn1O88597 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Becn1O88597 Gm24804-201ENSMUST00000174982 85 ntBASIC27.39■■□□□ 1.98
Becn1O88597 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Becn1O88597 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Becn1O88597 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Becn1O88597 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Becn1O88597 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Becn1O88597 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
Becn1O88597 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms