Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pfdn2O70591 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn2O70591 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn2O70591 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn2O70591 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.17■□□□□ 0.82
Pfdn2O70591 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Pfdn2O70591 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pfdn2O70591 Gm27322-201ENSMUST00000184007 104 ntBASIC20.16■□□□□ 0.82
Pfdn2O70591 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pfdn2O70591 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn2O70591 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn2O70591 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn2O70591 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.14■□□□□ 0.81
Pfdn2O70591 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn2O70591 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn2O70591 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn2O70591 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pfdn2O70591 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pfdn2O70591 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pfdn2O70591 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.13■□□□□ 0.81
Pfdn2O70591 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn2O70591 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pfdn2O70591 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn2O70591 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn2O70591 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Pfdn2O70591 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.12■□□□□ 0.81
Pfdn2O70591 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pfdn2O70591 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn2O70591 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pfdn2O70591 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Pfdn2O70591 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn2O70591 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn2O70591 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.09■□□□□ 0.81
Pfdn2O70591 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn2O70591 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn2O70591 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn2O70591 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.08■□□□□ 0.81
Pfdn2O70591 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pfdn2O70591 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn2O70591 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn2O70591 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn2O70591 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn2O70591 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Pfdn2O70591 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn2O70591 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn2O70591 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn2O70591 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pfdn2O70591 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn2O70591 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
Pfdn2O70591 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.04■□□□□ 0.8
Pfdn2O70591 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn2O70591 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn2O70591 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn2O70591 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn2O70591 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn2O70591 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn2O70591 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn2O70591 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn2O70591 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn2O70591 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn2O70591 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pfdn2O70591 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn2O70591 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Pfdn2O70591 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pfdn2O70591 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pfdn2O70591 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pfdn2O70591 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn2O70591 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn2O70591 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn2O70591 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn2O70591 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn2O70591 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn2O70591 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.97■□□□□ 0.79
Pfdn2O70591 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn2O70591 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Pfdn2O70591 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn2O70591 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn2O70591 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pfdn2O70591 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn2O70591 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn2O70591 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn2O70591 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn2O70591 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn2O70591 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pfdn2O70591 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn2O70591 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn2O70591 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pfdn2O70591 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn2O70591 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pfdn2O70591 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn2O70591 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn2O70591 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn2O70591 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn2O70591 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pfdn2O70591 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn2O70591 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn2O70591 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pfdn2O70591 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn2O70591 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pfdn2O70591 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms