Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa1O35683 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa1O35683 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.56■□□□□ 0.4
Ndufa1O35683 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa1O35683 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa1O35683 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa1O35683 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndufa1O35683 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.51■□□□□ 0.39
Ndufa1O35683 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Mipep-204ENSMUST00000225043 1548 ntBASIC17.51■□□□□ 0.39
Ndufa1O35683 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa1O35683 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa1O35683 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa1O35683 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ndufa1O35683 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ndufa1O35683 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa1O35683 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ndufa1O35683 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ndufa1O35683 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa1O35683 Gm27322-201ENSMUST00000184007 104 ntBASIC17.46■□□□□ 0.39
Ndufa1O35683 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.46■□□□□ 0.39
Ndufa1O35683 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa1O35683 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ndufa1O35683 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ndufa1O35683 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa1O35683 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa1O35683 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ndufa1O35683 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ndufa1O35683 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa1O35683 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ndufa1O35683 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.43■□□□□ 0.38
Ndufa1O35683 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ndufa1O35683 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.41■□□□□ 0.38
Ndufa1O35683 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ndufa1O35683 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndufa1O35683 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ndufa1O35683 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa1O35683 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ndufa1O35683 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ndufa1O35683 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndufa1O35683 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ndufa1O35683 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.37■□□□□ 0.37
Ndufa1O35683 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa1O35683 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndufa1O35683 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Ndufa1O35683 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa1O35683 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndufa1O35683 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndufa1O35683 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Ndufa1O35683 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa1O35683 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndufa1O35683 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndufa1O35683 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndufa1O35683 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.32■□□□□ 0.36
Ndufa1O35683 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.31■□□□□ 0.36
Ndufa1O35683 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ndufa1O35683 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndufa1O35683 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.3■□□□□ 0.36
Ndufa1O35683 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndufa1O35683 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndufa1O35683 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa1O35683 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ndufa1O35683 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndufa1O35683 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Ndufa1O35683 Gm26115-201ENSMUST00000175605 87 ntBASIC17.27■□□□□ 0.36
Ndufa1O35683 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndufa1O35683 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ndufa1O35683 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndufa1O35683 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa1O35683 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa1O35683 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa1O35683 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ndufa1O35683 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa1O35683 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa1O35683 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms