Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MsmbO08540 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MsmbO08540 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MsmbO08540 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MsmbO08540 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MsmbO08540 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MsmbO08540 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MsmbO08540 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
MsmbO08540 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.06■□□□□ 0.64
MsmbO08540 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.06■□□□□ 0.64
MsmbO08540 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MsmbO08540 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MsmbO08540 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.05■□□□□ 0.64
MsmbO08540 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.05■□□□□ 0.64
MsmbO08540 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MsmbO08540 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MsmbO08540 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MsmbO08540 Gm24970-201ENSMUST00000175582 82 ntBASIC19.04■□□□□ 0.64
MsmbO08540 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MsmbO08540 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MsmbO08540 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MsmbO08540 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MsmbO08540 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.02■□□□□ 0.64
MsmbO08540 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MsmbO08540 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MsmbO08540 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.01■□□□□ 0.63
MsmbO08540 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19■□□□□ 0.63
MsmbO08540 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MsmbO08540 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.99■□□□□ 0.63
MsmbO08540 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MsmbO08540 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MsmbO08540 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MsmbO08540 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MsmbO08540 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MsmbO08540 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MsmbO08540 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MsmbO08540 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MsmbO08540 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MsmbO08540 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MsmbO08540 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MsmbO08540 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MsmbO08540 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.95■□□□□ 0.62
MsmbO08540 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.95■□□□□ 0.62
MsmbO08540 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MsmbO08540 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MsmbO08540 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.94■□□□□ 0.62
MsmbO08540 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
MsmbO08540 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MsmbO08540 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MsmbO08540 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.93■□□□□ 0.62
MsmbO08540 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.93■□□□□ 0.62
MsmbO08540 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MsmbO08540 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MsmbO08540 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MsmbO08540 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MsmbO08540 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MsmbO08540 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MsmbO08540 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MsmbO08540 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.88■□□□□ 0.61
MsmbO08540 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MsmbO08540 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MsmbO08540 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MsmbO08540 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MsmbO08540 Zxda-201ENSMUST00000117281 2621 ntBASIC18.86■□□□□ 0.61
MsmbO08540 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MsmbO08540 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MsmbO08540 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MsmbO08540 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.84■□□□□ 0.61
MsmbO08540 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MsmbO08540 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MsmbO08540 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MsmbO08540 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MsmbO08540 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MsmbO08540 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MsmbO08540 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MsmbO08540 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
MsmbO08540 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MsmbO08540 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MsmbO08540 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MsmbO08540 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MsmbO08540 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MsmbO08540 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.79■□□□□ 0.6
MsmbO08540 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MsmbO08540 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MsmbO08540 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.78■□□□□ 0.6
MsmbO08540 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.78■□□□□ 0.6
MsmbO08540 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MsmbO08540 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MsmbO08540 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MsmbO08540 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MsmbO08540 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MsmbO08540 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
MsmbO08540 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MsmbO08540 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MsmbO08540 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.76■□□□□ 0.59
MsmbO08540 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.74■□□□□ 0.59
MsmbO08540 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MsmbO08540 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MsmbO08540 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.73■□□□□ 0.59
MsmbO08540 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms