Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Usp35M0QWN7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Usp35M0QWN7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Usp35M0QWN7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp35M0QWN7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.39■■□□□ 1.81
Usp35M0QWN7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Usp35M0QWN7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Usp35M0QWN7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Usp35M0QWN7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp35M0QWN7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Usp35M0QWN7 Zxda-201ENSMUST00000117281 2621 ntBASIC26.34■■□□□ 1.81
Usp35M0QWN7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Usp35M0QWN7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp35M0QWN7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp35M0QWN7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.32■■□□□ 1.8
Usp35M0QWN7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Usp35M0QWN7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp35M0QWN7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp35M0QWN7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp35M0QWN7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp35M0QWN7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp35M0QWN7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp35M0QWN7 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.28■■□□□ 1.8
Usp35M0QWN7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp35M0QWN7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp35M0QWN7 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.27■■□□□ 1.8
Usp35M0QWN7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp35M0QWN7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp35M0QWN7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp35M0QWN7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp35M0QWN7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Usp35M0QWN7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp35M0QWN7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp35M0QWN7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp35M0QWN7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp35M0QWN7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp35M0QWN7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.24■■□□□ 1.79
Usp35M0QWN7 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.24■■□□□ 1.79
Usp35M0QWN7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp35M0QWN7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Usp35M0QWN7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Usp35M0QWN7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp35M0QWN7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Usp35M0QWN7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp35M0QWN7 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.18■■□□□ 1.78
Usp35M0QWN7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp35M0QWN7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp35M0QWN7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp35M0QWN7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Usp35M0QWN7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Usp35M0QWN7 Gm8503-201ENSMUST00000118131 455 ntBASIC26.17■■□□□ 1.78
Usp35M0QWN7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.17■■□□□ 1.78
Usp35M0QWN7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Usp35M0QWN7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp35M0QWN7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Usp35M0QWN7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp35M0QWN7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp35M0QWN7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp35M0QWN7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Usp35M0QWN7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Usp35M0QWN7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Usp35M0QWN7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Usp35M0QWN7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Usp35M0QWN7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Usp35M0QWN7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp35M0QWN7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp35M0QWN7 Gm6821-201ENSMUST00000107540 542 ntBASIC26.12■■□□□ 1.77
Usp35M0QWN7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp35M0QWN7 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.1■■□□□ 1.77
Usp35M0QWN7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.1■■□□□ 1.77
Usp35M0QWN7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Usp35M0QWN7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Usp35M0QWN7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Usp35M0QWN7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
Usp35M0QWN7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp35M0QWN7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.08■■□□□ 1.77
Usp35M0QWN7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Usp35M0QWN7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.08■■□□□ 1.77
Usp35M0QWN7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Usp35M0QWN7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Usp35M0QWN7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Usp35M0QWN7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Usp35M0QWN7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Usp35M0QWN7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Usp35M0QWN7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp35M0QWN7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.03■■□□□ 1.76
Usp35M0QWN7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Usp35M0QWN7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Usp35M0QWN7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Usp35M0QWN7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Usp35M0QWN7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Usp35M0QWN7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Usp35M0QWN7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.98■■□□□ 1.75
Usp35M0QWN7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Usp35M0QWN7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Usp35M0QWN7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.98■■□□□ 1.75
Usp35M0QWN7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Usp35M0QWN7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Usp35M0QWN7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Usp35M0QWN7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms