Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm21788J3QNH3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm21788J3QNH3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21788J3QNH3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21788J3QNH3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21788J3QNH3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gm21788J3QNH3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm21788J3QNH3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm21788J3QNH3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm21788J3QNH3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Gm21788J3QNH3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm21788J3QNH3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm21788J3QNH3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm21788J3QNH3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm21788J3QNH3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm21788J3QNH3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm21788J3QNH3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Gm21788J3QNH3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm21788J3QNH3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm21788J3QNH3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm21788J3QNH3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm21788J3QNH3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm21788J3QNH3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm21788J3QNH3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.78■□□□□ 0.92
Gm21788J3QNH3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm21788J3QNH3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm21788J3QNH3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm21788J3QNH3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm21788J3QNH3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gm21788J3QNH3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Gm21788J3QNH3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Gm21788J3QNH3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm21788J3QNH3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm21788J3QNH3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm21788J3QNH3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm21788J3QNH3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm21788J3QNH3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm21788J3QNH3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm21788J3QNH3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.73■□□□□ 0.91
Gm21788J3QNH3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm21788J3QNH3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm21788J3QNH3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm21788J3QNH3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm21788J3QNH3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm21788J3QNH3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm21788J3QNH3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm21788J3QNH3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.69■□□□□ 0.9
Gm21788J3QNH3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm21788J3QNH3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm21788J3QNH3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm21788J3QNH3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm21788J3QNH3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm21788J3QNH3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm21788J3QNH3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm21788J3QNH3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm21788J3QNH3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm21788J3QNH3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm21788J3QNH3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm21788J3QNH3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm21788J3QNH3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm21788J3QNH3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.65■□□□□ 0.9
Gm21788J3QNH3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm21788J3QNH3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm21788J3QNH3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm21788J3QNH3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm21788J3QNH3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.63■□□□□ 0.89
Gm21788J3QNH3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gm21788J3QNH3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm21788J3QNH3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
Gm21788J3QNH3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm21788J3QNH3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm21788J3QNH3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm21788J3QNH3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm21788J3QNH3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm21788J3QNH3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Gm21788J3QNH3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm21788J3QNH3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm21788J3QNH3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm21788J3QNH3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm21788J3QNH3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm21788J3QNH3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm21788J3QNH3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm21788J3QNH3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm21788J3QNH3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm21788J3QNH3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm21788J3QNH3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm21788J3QNH3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm21788J3QNH3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm21788J3QNH3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm21788J3QNH3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm21788J3QNH3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm21788J3QNH3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm21788J3QNH3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm21788J3QNH3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms