Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Krt28A6BLY7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.47■■■□□ 2.15
Krt28A6BLY7 Gm11599-201ENSMUST00000118720 878 ntBASIC28.47■■■□□ 2.15
Krt28A6BLY7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Krt28A6BLY7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Krt28A6BLY7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Krt28A6BLY7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Krt28A6BLY7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.45■■■□□ 2.14
Krt28A6BLY7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Krt28A6BLY7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Krt28A6BLY7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Krt28A6BLY7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Krt28A6BLY7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Krt28A6BLY7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.41■■■□□ 2.14
Krt28A6BLY7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Krt28A6BLY7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Krt28A6BLY7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.38■■■□□ 2.13
Krt28A6BLY7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Krt28A6BLY7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.37■■■□□ 2.13
Krt28A6BLY7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Krt28A6BLY7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Krt28A6BLY7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Krt28A6BLY7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Krt28A6BLY7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.36■■■□□ 2.13
Krt28A6BLY7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.36■■■□□ 2.13
Krt28A6BLY7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Krt28A6BLY7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Krt28A6BLY7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Krt28A6BLY7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Krt28A6BLY7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Krt28A6BLY7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Krt28A6BLY7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Krt28A6BLY7 Mir6538-201ENSMUST00000183713 110 ntBASIC28.33■■■□□ 2.13
Krt28A6BLY7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Krt28A6BLY7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Krt28A6BLY7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Krt28A6BLY7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Krt28A6BLY7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Krt28A6BLY7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Krt28A6BLY7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Krt28A6BLY7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Krt28A6BLY7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Krt28A6BLY7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Krt28A6BLY7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Krt28A6BLY7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Krt28A6BLY7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.22■■■□□ 2.11
Krt28A6BLY7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Krt28A6BLY7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Krt28A6BLY7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Krt28A6BLY7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Krt28A6BLY7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.2■■■□□ 2.1
Krt28A6BLY7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Krt28A6BLY7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Krt28A6BLY7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Krt28A6BLY7 Gm11175-201ENSMUST00000116172 543 ntBASIC28.19■■■□□ 2.1
Krt28A6BLY7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
Krt28A6BLY7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Krt28A6BLY7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Krt28A6BLY7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Krt28A6BLY7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Krt28A6BLY7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Krt28A6BLY7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Krt28A6BLY7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.15■■■□□ 2.1
Krt28A6BLY7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Krt28A6BLY7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.14■■■□□ 2.1
Krt28A6BLY7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Krt28A6BLY7 Cap2-205ENSMUST00000225824 1634 ntBASIC28.12■■■□□ 2.09
Krt28A6BLY7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Krt28A6BLY7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.12■■■□□ 2.09
Krt28A6BLY7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.1■■■□□ 2.09
Krt28A6BLY7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Krt28A6BLY7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Krt28A6BLY7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.05■■■□□ 2.08
Krt28A6BLY7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Krt28A6BLY7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Krt28A6BLY7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.03■■■□□ 2.08
Krt28A6BLY7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.03■■■□□ 2.08
Krt28A6BLY7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Krt28A6BLY7 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.02■■■□□ 2.08
Krt28A6BLY7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Krt28A6BLY7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.01■■■□□ 2.07
Krt28A6BLY7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Krt28A6BLY7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Krt28A6BLY7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Krt28A6BLY7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Krt28A6BLY7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.98■■■□□ 2.07
Krt28A6BLY7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Krt28A6BLY7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Krt28A6BLY7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.97■■■□□ 2.07
Krt28A6BLY7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Krt28A6BLY7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.97■■■□□ 2.07
Krt28A6BLY7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Krt28A6BLY7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Krt28A6BLY7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Krt28A6BLY7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Krt28A6BLY7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
Krt28A6BLY7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
Krt28A6BLY7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Krt28A6BLY7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Krt28A6BLY7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.93■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms