Protein–RNA interactions for Protein: A0A1B0GRE8

Zscan4e, Zinc finger and SCAN domain-containing 4E, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zscan4eA0A1B0GRE8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Zscan4eA0A1B0GRE8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Zscan4eA0A1B0GRE8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Zscan4eA0A1B0GRE8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Zscan4eA0A1B0GRE8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Zscan4eA0A1B0GRE8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Zscan4eA0A1B0GRE8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Zscan4eA0A1B0GRE8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Zscan4eA0A1B0GRE8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Zscan4eA0A1B0GRE8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Zscan4eA0A1B0GRE8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Zscan4eA0A1B0GRE8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Zscan4eA0A1B0GRE8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Zscan4eA0A1B0GRE8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Zscan4eA0A1B0GRE8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Zscan4eA0A1B0GRE8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Zscan4eA0A1B0GRE8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Zscan4eA0A1B0GRE8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Zscan4eA0A1B0GRE8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.49■■□□□ 1.51
Zscan4eA0A1B0GRE8 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.49■■□□□ 1.51
Zscan4eA0A1B0GRE8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Zscan4eA0A1B0GRE8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zscan4eA0A1B0GRE8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zscan4eA0A1B0GRE8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Zscan4eA0A1B0GRE8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Zscan4eA0A1B0GRE8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Zscan4eA0A1B0GRE8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Zscan4eA0A1B0GRE8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Zscan4eA0A1B0GRE8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.45■■□□□ 1.5
Zscan4eA0A1B0GRE8 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.45■■□□□ 1.5
Zscan4eA0A1B0GRE8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Zscan4eA0A1B0GRE8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zscan4eA0A1B0GRE8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zscan4eA0A1B0GRE8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zscan4eA0A1B0GRE8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Zscan4eA0A1B0GRE8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zscan4eA0A1B0GRE8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zscan4eA0A1B0GRE8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zscan4eA0A1B0GRE8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.41■■□□□ 1.5
Zscan4eA0A1B0GRE8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zscan4eA0A1B0GRE8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zscan4eA0A1B0GRE8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zscan4eA0A1B0GRE8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Zscan4eA0A1B0GRE8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zscan4eA0A1B0GRE8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Zscan4eA0A1B0GRE8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Zscan4eA0A1B0GRE8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Zscan4eA0A1B0GRE8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Gm6821-201ENSMUST00000107540 542 ntBASIC24.35■■□□□ 1.49
Zscan4eA0A1B0GRE8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Zscan4eA0A1B0GRE8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Zscan4eA0A1B0GRE8 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.34■■□□□ 1.49
Zscan4eA0A1B0GRE8 Gm8503-201ENSMUST00000118131 455 ntBASIC24.33■■□□□ 1.49
Zscan4eA0A1B0GRE8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Zscan4eA0A1B0GRE8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Zscan4eA0A1B0GRE8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Zscan4eA0A1B0GRE8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zscan4eA0A1B0GRE8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.29■■□□□ 1.48
Zscan4eA0A1B0GRE8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Zscan4eA0A1B0GRE8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.29■■□□□ 1.48
Zscan4eA0A1B0GRE8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.28■■□□□ 1.48
Zscan4eA0A1B0GRE8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zscan4eA0A1B0GRE8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Zscan4eA0A1B0GRE8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Zscan4eA0A1B0GRE8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zscan4eA0A1B0GRE8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Zscan4eA0A1B0GRE8 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.24■■□□□ 1.47
Zscan4eA0A1B0GRE8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zscan4eA0A1B0GRE8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zscan4eA0A1B0GRE8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.23■■□□□ 1.47
Zscan4eA0A1B0GRE8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zscan4eA0A1B0GRE8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zscan4eA0A1B0GRE8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Zscan4eA0A1B0GRE8 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.22■■□□□ 1.47
Zscan4eA0A1B0GRE8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zscan4eA0A1B0GRE8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zscan4eA0A1B0GRE8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zscan4eA0A1B0GRE8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zscan4eA0A1B0GRE8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zscan4eA0A1B0GRE8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zscan4eA0A1B0GRE8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.21■■□□□ 1.47
Zscan4eA0A1B0GRE8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Zscan4eA0A1B0GRE8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Zscan4eA0A1B0GRE8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Zscan4eA0A1B0GRE8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zscan4eA0A1B0GRE8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zscan4eA0A1B0GRE8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zscan4eA0A1B0GRE8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.16■■□□□ 1.46
Zscan4eA0A1B0GRE8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Zscan4eA0A1B0GRE8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms