Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.19■□□□□ 0.34
Trbv13-2A0A140T8N6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv13-2A0A140T8N6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.18■□□□□ 0.34
Trbv13-2A0A140T8N6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.18■□□□□ 0.34
Trbv13-2A0A140T8N6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-2A0A140T8N6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv13-2A0A140T8N6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-2A0A140T8N6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv13-2A0A140T8N6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-2A0A140T8N6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.16■□□□□ 0.34
Trbv13-2A0A140T8N6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-2A0A140T8N6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-2A0A140T8N6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv13-2A0A140T8N6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv13-2A0A140T8N6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-2A0A140T8N6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-2A0A140T8N6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv13-2A0A140T8N6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-2A0A140T8N6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.12■□□□□ 0.33
Trbv13-2A0A140T8N6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-2A0A140T8N6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-2A0A140T8N6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-2A0A140T8N6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-2A0A140T8N6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-2A0A140T8N6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-2A0A140T8N6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.1■□□□□ 0.33
Trbv13-2A0A140T8N6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv13-2A0A140T8N6 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.09■□□□□ 0.33
Trbv13-2A0A140T8N6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
Trbv13-2A0A140T8N6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.08■□□□□ 0.33
Trbv13-2A0A140T8N6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-2A0A140T8N6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-2A0A140T8N6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-2A0A140T8N6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-2A0A140T8N6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-2A0A140T8N6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.06■□□□□ 0.32
Trbv13-2A0A140T8N6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv13-2A0A140T8N6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv13-2A0A140T8N6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv13-2A0A140T8N6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trbv13-2A0A140T8N6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-2A0A140T8N6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv13-2A0A140T8N6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Trbv13-2A0A140T8N6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Trbv13-2A0A140T8N6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv13-2A0A140T8N6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-2A0A140T8N6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.01■□□□□ 0.31
Trbv13-2A0A140T8N6 Gm9397-201ENSMUST00000200125 605 ntBASIC17■□□□□ 0.31
Trbv13-2A0A140T8N6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv13-2A0A140T8N6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv13-2A0A140T8N6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-2A0A140T8N6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-2A0A140T8N6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-2A0A140T8N6 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.97■□□□□ 0.31
Trbv13-2A0A140T8N6 Gm45855-201ENSMUST00000212546 880 ntBASIC16.97■□□□□ 0.31
Trbv13-2A0A140T8N6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv13-2A0A140T8N6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv13-2A0A140T8N6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv13-2A0A140T8N6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv13-2A0A140T8N6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-2A0A140T8N6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.95■□□□□ 0.3
Trbv13-2A0A140T8N6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-2A0A140T8N6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-2A0A140T8N6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-2A0A140T8N6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-2A0A140T8N6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Trbv13-2A0A140T8N6 Amer2-203ENSMUST00000225247 2662 ntBASIC16.93■□□□□ 0.3
Trbv13-2A0A140T8N6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-2A0A140T8N6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv13-2A0A140T8N6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Gm24970-201ENSMUST00000175582 82 ntBASIC16.91■□□□□ 0.3
Trbv13-2A0A140T8N6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trbv13-2A0A140T8N6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-2A0A140T8N6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trbv13-2A0A140T8N6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.9■□□□□ 0.3
Trbv13-2A0A140T8N6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-2A0A140T8N6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-2A0A140T8N6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms