Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Lcmt1A0A0U1RNF2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
Lcmt1A0A0U1RNF2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.4■■□□□ 1.98
Lcmt1A0A0U1RNF2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
Lcmt1A0A0U1RNF2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lcmt1A0A0U1RNF2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Lcmt1A0A0U1RNF2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lcmt1A0A0U1RNF2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lcmt1A0A0U1RNF2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Lcmt1A0A0U1RNF2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Lcmt1A0A0U1RNF2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Lcmt1A0A0U1RNF2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Lcmt1A0A0U1RNF2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Lcmt1A0A0U1RNF2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Lcmt1A0A0U1RNF2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.33■■□□□ 1.96
Lcmt1A0A0U1RNF2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lcmt1A0A0U1RNF2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Lcmt1A0A0U1RNF2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lcmt1A0A0U1RNF2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Lcmt1A0A0U1RNF2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Lcmt1A0A0U1RNF2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
Lcmt1A0A0U1RNF2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lcmt1A0A0U1RNF2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lcmt1A0A0U1RNF2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.26■■□□□ 1.95
Lcmt1A0A0U1RNF2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Lcmt1A0A0U1RNF2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Lcmt1A0A0U1RNF2 Zfp131-205ENSMUST00000223812 663 ntBASIC27.24■■□□□ 1.95
Lcmt1A0A0U1RNF2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lcmt1A0A0U1RNF2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Lcmt1A0A0U1RNF2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Lcmt1A0A0U1RNF2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Lcmt1A0A0U1RNF2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Lcmt1A0A0U1RNF2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lcmt1A0A0U1RNF2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Lcmt1A0A0U1RNF2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Lcmt1A0A0U1RNF2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Lcmt1A0A0U1RNF2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.18■■□□□ 1.94
Lcmt1A0A0U1RNF2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.18■■□□□ 1.94
Lcmt1A0A0U1RNF2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Lcmt1A0A0U1RNF2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Lcmt1A0A0U1RNF2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Lcmt1A0A0U1RNF2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt1A0A0U1RNF2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt1A0A0U1RNF2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt1A0A0U1RNF2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt1A0A0U1RNF2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt1A0A0U1RNF2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Lcmt1A0A0U1RNF2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lcmt1A0A0U1RNF2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.16■■□□□ 1.94
Lcmt1A0A0U1RNF2 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.15■■□□□ 1.94
Lcmt1A0A0U1RNF2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Lcmt1A0A0U1RNF2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Lcmt1A0A0U1RNF2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Lcmt1A0A0U1RNF2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
Lcmt1A0A0U1RNF2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lcmt1A0A0U1RNF2 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.13■■□□□ 1.93
Lcmt1A0A0U1RNF2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lcmt1A0A0U1RNF2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Lcmt1A0A0U1RNF2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Lcmt1A0A0U1RNF2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.11■■□□□ 1.93
Lcmt1A0A0U1RNF2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lcmt1A0A0U1RNF2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lcmt1A0A0U1RNF2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lcmt1A0A0U1RNF2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.08■■□□□ 1.93
Lcmt1A0A0U1RNF2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lcmt1A0A0U1RNF2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.07■■□□□ 1.92
Lcmt1A0A0U1RNF2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Lcmt1A0A0U1RNF2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Lcmt1A0A0U1RNF2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Lcmt1A0A0U1RNF2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Lcmt1A0A0U1RNF2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Lcmt1A0A0U1RNF2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lcmt1A0A0U1RNF2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lcmt1A0A0U1RNF2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.02■■□□□ 1.92
Lcmt1A0A0U1RNF2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lcmt1A0A0U1RNF2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27■■□□□ 1.91
Lcmt1A0A0U1RNF2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lcmt1A0A0U1RNF2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Lcmt1A0A0U1RNF2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Lcmt1A0A0U1RNF2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.97■■□□□ 1.91
Lcmt1A0A0U1RNF2 Amer2-203ENSMUST00000225247 2662 ntBASIC26.97■■□□□ 1.91
Lcmt1A0A0U1RNF2 Gm9397-201ENSMUST00000200125 605 ntBASIC26.96■■□□□ 1.91
Lcmt1A0A0U1RNF2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
Lcmt1A0A0U1RNF2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Lcmt1A0A0U1RNF2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.95■■□□□ 1.9
Lcmt1A0A0U1RNF2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.94■■□□□ 1.9
Lcmt1A0A0U1RNF2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Lcmt1A0A0U1RNF2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Lcmt1A0A0U1RNF2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Lcmt1A0A0U1RNF2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.9■■□□□ 1.9
Lcmt1A0A0U1RNF2 Gm24970-201ENSMUST00000175582 82 ntBASIC26.9■■□□□ 1.9
Lcmt1A0A0U1RNF2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Lcmt1A0A0U1RNF2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.89■■□□□ 1.9
Lcmt1A0A0U1RNF2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Lcmt1A0A0U1RNF2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms