Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ighv1-78A0A0G2JGN3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.45■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.44■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-78A0A0G2JGN3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.41■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-78A0A0G2JGN3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-78A0A0G2JGN3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ighv1-78A0A0G2JGN3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ighv1-78A0A0G2JGN3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.33■■□□□ 1.17
Ighv1-78A0A0G2JGN3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.33■■□□□ 1.17
Ighv1-78A0A0G2JGN3 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.32■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-78A0A0G2JGN3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.31■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.29■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ighv1-78A0A0G2JGN3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Zxda-201ENSMUST00000117281 2621 ntBASIC22.24■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv1-78A0A0G2JGN3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ighv1-78A0A0G2JGN3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.2■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-78A0A0G2JGN3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.19■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.18■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-78A0A0G2JGN3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-78A0A0G2JGN3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.14■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.14■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ighv1-78A0A0G2JGN3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.13■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-78A0A0G2JGN3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.11■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-78A0A0G2JGN3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-78A0A0G2JGN3 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.07■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.07■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.07■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.05■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.02■■□□□ 1.12
Ighv1-78A0A0G2JGN3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ighv1-78A0A0G2JGN3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-78A0A0G2JGN3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-78A0A0G2JGN3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-78A0A0G2JGN3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms