Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Peli2-204ENSMUST00000226513 1320 ntBASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Gm8109-201ENSMUST00000194076 746 ntBASIC16.79■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Gm26115-201ENSMUST00000175605 87 ntBASIC16.78■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trav13d-4A0A0G2JFX3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13d-4A0A0G2JFX3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-4A0A0G2JFX3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.65■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-4A0A0G2JFX3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13d-4A0A0G2JFX3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13d-4A0A0G2JFX3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-4A0A0G2JFX3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.57■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms