Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.72■□□□□ 0.43
Trav13n-1A0A0G2JEU8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-1A0A0G2JEU8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.67■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav13n-1A0A0G2JEU8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-1A0A0G2JEU8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.64■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.64■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-1A0A0G2JEU8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13n-1A0A0G2JEU8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.62■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav13n-1A0A0G2JEU8 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.61■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav13n-1A0A0G2JEU8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-1A0A0G2JEU8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-1A0A0G2JEU8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-1A0A0G2JEU8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav13n-1A0A0G2JEU8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.5■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-1A0A0G2JEU8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13n-1A0A0G2JEU8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Gm6821-201ENSMUST00000107540 542 ntBASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-1A0A0G2JEU8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms