Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv8-28A0A0G2JE47 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Mipep-204ENSMUST00000225043 1548 ntBASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-28A0A0G2JE47 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC15.37■□□□□ 0.05
Igkv8-28A0A0G2JE47 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15.37■□□□□ 0.05
Igkv8-28A0A0G2JE47 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv8-28A0A0G2JE47 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv8-28A0A0G2JE47 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv8-28A0A0G2JE47 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Igkv8-28A0A0G2JE47 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv8-28A0A0G2JE47 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-28A0A0G2JE47 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC15.33■□□□□ 0.05
Igkv8-28A0A0G2JE47 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv8-28A0A0G2JE47 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Igkv8-28A0A0G2JE47 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-28A0A0G2JE47 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-28A0A0G2JE47 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-28A0A0G2JE47 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-28A0A0G2JE47 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Igkv8-28A0A0G2JE47 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv8-28A0A0G2JE47 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Igkv8-28A0A0G2JE47 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-28A0A0G2JE47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-28A0A0G2JE47 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-28A0A0G2JE47 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-28A0A0G2JE47 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-28A0A0G2JE47 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv8-28A0A0G2JE47 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv8-28A0A0G2JE47 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv8-28A0A0G2JE47 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-28A0A0G2JE47 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Igkv8-28A0A0G2JE47 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-28A0A0G2JE47 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-28A0A0G2JE47 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Igkv8-28A0A0G2JE47 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-28A0A0G2JE47 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Igkv8-28A0A0G2JE47 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-28A0A0G2JE47 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Igkv8-28A0A0G2JE47 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-28A0A0G2JE47 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-28A0A0G2JE47 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Igkv8-28A0A0G2JE47 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-28A0A0G2JE47 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-28A0A0G2JE47 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-28A0A0G2JE47 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-28A0A0G2JE47 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-28A0A0G2JE47 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-28A0A0G2JE47 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-28A0A0G2JE47 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv8-28A0A0G2JE47 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Igkv8-28A0A0G2JE47 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Gm25262-201ENSMUST00000174934 133 ntBASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-28A0A0G2JE47 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.16■□□□□ 0.02
Igkv8-28A0A0G2JE47 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-28A0A0G2JE47 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv8-28A0A0G2JE47 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-28A0A0G2JE47 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-28A0A0G2JE47 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-28A0A0G2JE47 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-28A0A0G2JE47 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv8-28A0A0G2JE47 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-28A0A0G2JE47 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-28A0A0G2JE47 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-28A0A0G2JE47 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-28A0A0G2JE47 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms