Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv26A0A0B4J1P5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv26A0A0B4J1P5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv26A0A0B4J1P5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv26A0A0B4J1P5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv26A0A0B4J1P5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Gm24970-201ENSMUST00000175582 82 ntBASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv26A0A0B4J1P5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv26A0A0B4J1P5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trbv26A0A0B4J1P5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv26A0A0B4J1P5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv26A0A0B4J1P5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv26A0A0B4J1P5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv26A0A0B4J1P5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Trbv26A0A0B4J1P5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv26A0A0B4J1P5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv26A0A0B4J1P5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv26A0A0B4J1P5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trbv26A0A0B4J1P5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv26A0A0B4J1P5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv26A0A0B4J1P5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv26A0A0B4J1P5 Zxda-201ENSMUST00000117281 2621 ntBASIC20.32■□□□□ 0.84
Trbv26A0A0B4J1P5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.27■□□□□ 0.84
Trbv26A0A0B4J1P5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv26A0A0B4J1P5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv26A0A0B4J1P5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.23■□□□□ 0.83
Trbv26A0A0B4J1P5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv26A0A0B4J1P5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv26A0A0B4J1P5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv26A0A0B4J1P5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms