Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav19A0A0B4J1K4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav19A0A0B4J1K4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav19A0A0B4J1K4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav19A0A0B4J1K4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav19A0A0B4J1K4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav19A0A0B4J1K4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav19A0A0B4J1K4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav19A0A0B4J1K4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav19A0A0B4J1K4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav19A0A0B4J1K4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav19A0A0B4J1K4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav19A0A0B4J1K4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav19A0A0B4J1K4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav19A0A0B4J1K4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav19A0A0B4J1K4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav19A0A0B4J1K4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav19A0A0B4J1K4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav19A0A0B4J1K4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav19A0A0B4J1K4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav19A0A0B4J1K4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav19A0A0B4J1K4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav19A0A0B4J1K4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav19A0A0B4J1K4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav19A0A0B4J1K4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav19A0A0B4J1K4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav19A0A0B4J1K4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav19A0A0B4J1K4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav19A0A0B4J1K4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav19A0A0B4J1K4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav19A0A0B4J1K4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav19A0A0B4J1K4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.24■□□□□ 0.51
Trav19A0A0B4J1K4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav19A0A0B4J1K4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav19A0A0B4J1K4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.23■□□□□ 0.51
Trav19A0A0B4J1K4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav19A0A0B4J1K4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav19A0A0B4J1K4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav19A0A0B4J1K4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav19A0A0B4J1K4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav19A0A0B4J1K4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav19A0A0B4J1K4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trav19A0A0B4J1K4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav19A0A0B4J1K4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav19A0A0B4J1K4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav19A0A0B4J1K4 Peli2-204ENSMUST00000226513 1320 ntBASIC18.19■□□□□ 0.5
Trav19A0A0B4J1K4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav19A0A0B4J1K4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.17■□□□□ 0.5
Trav19A0A0B4J1K4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav19A0A0B4J1K4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav19A0A0B4J1K4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav19A0A0B4J1K4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav19A0A0B4J1K4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav19A0A0B4J1K4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav19A0A0B4J1K4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav19A0A0B4J1K4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav19A0A0B4J1K4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav19A0A0B4J1K4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav19A0A0B4J1K4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav19A0A0B4J1K4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav19A0A0B4J1K4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav19A0A0B4J1K4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav19A0A0B4J1K4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav19A0A0B4J1K4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav19A0A0B4J1K4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav19A0A0B4J1K4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Trav19A0A0B4J1K4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav19A0A0B4J1K4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav19A0A0B4J1K4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav19A0A0B4J1K4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav19A0A0B4J1K4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav19A0A0B4J1K4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav19A0A0B4J1K4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav19A0A0B4J1K4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav19A0A0B4J1K4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav19A0A0B4J1K4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav19A0A0B4J1K4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav19A0A0B4J1K4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.07■□□□□ 0.48
Trav19A0A0B4J1K4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav19A0A0B4J1K4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.07■□□□□ 0.48
Trav19A0A0B4J1K4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav19A0A0B4J1K4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trav19A0A0B4J1K4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav19A0A0B4J1K4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav19A0A0B4J1K4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms