Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav11A0A0B4J1J9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav11A0A0B4J1J9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav11A0A0B4J1J9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav11A0A0B4J1J9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav11A0A0B4J1J9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav11A0A0B4J1J9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav11A0A0B4J1J9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav11A0A0B4J1J9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav11A0A0B4J1J9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav11A0A0B4J1J9 Gm27322-201ENSMUST00000184007 104 ntBASIC16.82■□□□□ 0.28
Trav11A0A0B4J1J9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav11A0A0B4J1J9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav11A0A0B4J1J9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav11A0A0B4J1J9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav11A0A0B4J1J9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav11A0A0B4J1J9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav11A0A0B4J1J9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav11A0A0B4J1J9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Trav11A0A0B4J1J9 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.78■□□□□ 0.28
Trav11A0A0B4J1J9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav11A0A0B4J1J9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav11A0A0B4J1J9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav11A0A0B4J1J9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav11A0A0B4J1J9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav11A0A0B4J1J9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav11A0A0B4J1J9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav11A0A0B4J1J9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Trav11A0A0B4J1J9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav11A0A0B4J1J9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav11A0A0B4J1J9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav11A0A0B4J1J9 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.76■□□□□ 0.27
Trav11A0A0B4J1J9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav11A0A0B4J1J9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav11A0A0B4J1J9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav11A0A0B4J1J9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav11A0A0B4J1J9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav11A0A0B4J1J9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav11A0A0B4J1J9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav11A0A0B4J1J9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.74■□□□□ 0.27
Trav11A0A0B4J1J9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav11A0A0B4J1J9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav11A0A0B4J1J9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav11A0A0B4J1J9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav11A0A0B4J1J9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav11A0A0B4J1J9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav11A0A0B4J1J9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav11A0A0B4J1J9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav11A0A0B4J1J9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav11A0A0B4J1J9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav11A0A0B4J1J9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav11A0A0B4J1J9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav11A0A0B4J1J9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav11A0A0B4J1J9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav11A0A0B4J1J9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav11A0A0B4J1J9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav11A0A0B4J1J9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav11A0A0B4J1J9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav11A0A0B4J1J9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav11A0A0B4J1J9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav11A0A0B4J1J9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav11A0A0B4J1J9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav11A0A0B4J1J9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav11A0A0B4J1J9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav11A0A0B4J1J9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav11A0A0B4J1J9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trav11A0A0B4J1J9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav11A0A0B4J1J9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav11A0A0B4J1J9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav11A0A0B4J1J9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav11A0A0B4J1J9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav11A0A0B4J1J9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.59■□□□□ 0.25
Trav11A0A0B4J1J9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav11A0A0B4J1J9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav11A0A0B4J1J9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Trav11A0A0B4J1J9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms