Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Zfp131-205ENSMUST00000223812 663 ntBASIC18.59■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-12A0A0A6YXJ9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.58■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.58■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.53■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-12A0A0A6YXJ9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.51■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.5■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.47■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.46■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.46■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-12A0A0A6YXJ9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.43■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.41■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
Ighv1-12A0A0A6YXJ9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Amer2-203ENSMUST00000225247 2662 ntBASIC18.38■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Gm9397-201ENSMUST00000200125 605 ntBASIC18.38■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-12A0A0A6YXJ9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Gm45855-201ENSMUST00000212546 880 ntBASIC18.32■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.31■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Gm24970-201ENSMUST00000175582 82 ntBASIC18.3■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ighv1-12A0A0A6YXJ9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms