Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv6-4A0A0A6YX19 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv6-4A0A0A6YX19 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv6-4A0A0A6YX19 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv6-4A0A0A6YX19 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv6-4A0A0A6YX19 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv6-4A0A0A6YX19 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv6-4A0A0A6YX19 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv6-4A0A0A6YX19 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ighv6-4A0A0A6YX19 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv6-4A0A0A6YX19 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv6-4A0A0A6YX19 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ighv6-4A0A0A6YX19 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv6-4A0A0A6YX19 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ighv6-4A0A0A6YX19 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ighv6-4A0A0A6YX19 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv6-4A0A0A6YX19 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.46■□□□□ 0.71
Ighv6-4A0A0A6YX19 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv6-4A0A0A6YX19 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv6-4A0A0A6YX19 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv6-4A0A0A6YX19 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv6-4A0A0A6YX19 Rab21-202ENSMUST00000218831 843 ntBASIC19.45■□□□□ 0.7
Ighv6-4A0A0A6YX19 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv6-4A0A0A6YX19 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv6-4A0A0A6YX19 Mipep-204ENSMUST00000225043 1548 ntBASIC19.43■□□□□ 0.7
Ighv6-4A0A0A6YX19 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv6-4A0A0A6YX19 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv6-4A0A0A6YX19 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ighv6-4A0A0A6YX19 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv6-4A0A0A6YX19 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv6-4A0A0A6YX19 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ighv6-4A0A0A6YX19 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv6-4A0A0A6YX19 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv6-4A0A0A6YX19 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv6-4A0A0A6YX19 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv6-4A0A0A6YX19 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv6-4A0A0A6YX19 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv6-4A0A0A6YX19 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv6-4A0A0A6YX19 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv6-4A0A0A6YX19 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv6-4A0A0A6YX19 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Ighv6-4A0A0A6YX19 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv6-4A0A0A6YX19 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ighv6-4A0A0A6YX19 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv6-4A0A0A6YX19 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv6-4A0A0A6YX19 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv6-4A0A0A6YX19 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv6-4A0A0A6YX19 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.31■□□□□ 0.68
Ighv6-4A0A0A6YX19 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-4A0A0A6YX19 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ighv6-4A0A0A6YX19 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv6-4A0A0A6YX19 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.27■□□□□ 0.68
Ighv6-4A0A0A6YX19 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-4A0A0A6YX19 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-4A0A0A6YX19 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-4A0A0A6YX19 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-4A0A0A6YX19 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv6-4A0A0A6YX19 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv6-4A0A0A6YX19 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv6-4A0A0A6YX19 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv6-4A0A0A6YX19 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv6-4A0A0A6YX19 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv6-4A0A0A6YX19 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv6-4A0A0A6YX19 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv6-4A0A0A6YX19 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv6-4A0A0A6YX19 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv6-4A0A0A6YX19 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv6-4A0A0A6YX19 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.22■□□□□ 0.67
Ighv6-4A0A0A6YX19 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ighv6-4A0A0A6YX19 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv6-4A0A0A6YX19 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv6-4A0A0A6YX19 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv6-4A0A0A6YX19 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.21■□□□□ 0.67
Ighv6-4A0A0A6YX19 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv6-4A0A0A6YX19 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv6-4A0A0A6YX19 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv6-4A0A0A6YX19 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv6-4A0A0A6YX19 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv6-4A0A0A6YX19 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv6-4A0A0A6YX19 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv6-4A0A0A6YX19 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ighv6-4A0A0A6YX19 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv6-4A0A0A6YX19 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv6-4A0A0A6YX19 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms