Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-9A0A0A6YW37 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ighv1-9A0A0A6YW37 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ighv1-9A0A0A6YW37 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-9A0A0A6YW37 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-9A0A0A6YW37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-9A0A0A6YW37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-9A0A0A6YW37 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-9A0A0A6YW37 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-9A0A0A6YW37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-9A0A0A6YW37 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-9A0A0A6YW37 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-9A0A0A6YW37 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-9A0A0A6YW37 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-9A0A0A6YW37 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-9A0A0A6YW37 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-9A0A0A6YW37 Gm16148-201ENSMUST00000119653 893 ntBASIC18.49■□□□□ 0.55
Ighv1-9A0A0A6YW37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-9A0A0A6YW37 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-9A0A0A6YW37 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-9A0A0A6YW37 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-9A0A0A6YW37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-9A0A0A6YW37 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-9A0A0A6YW37 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv1-9A0A0A6YW37 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-9A0A0A6YW37 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ighv1-9A0A0A6YW37 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ighv1-9A0A0A6YW37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-9A0A0A6YW37 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Ighv1-9A0A0A6YW37 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-9A0A0A6YW37 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.43■□□□□ 0.54
Ighv1-9A0A0A6YW37 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-9A0A0A6YW37 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-9A0A0A6YW37 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.42■□□□□ 0.54
Ighv1-9A0A0A6YW37 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.41■□□□□ 0.54
Ighv1-9A0A0A6YW37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.41■□□□□ 0.54
Ighv1-9A0A0A6YW37 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-9A0A0A6YW37 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-9A0A0A6YW37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-9A0A0A6YW37 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-9A0A0A6YW37 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-9A0A0A6YW37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-9A0A0A6YW37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.39■□□□□ 0.53
Ighv1-9A0A0A6YW37 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-9A0A0A6YW37 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-9A0A0A6YW37 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-9A0A0A6YW37 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-9A0A0A6YW37 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-9A0A0A6YW37 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-9A0A0A6YW37 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-9A0A0A6YW37 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.37■□□□□ 0.53
Ighv1-9A0A0A6YW37 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-9A0A0A6YW37 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-9A0A0A6YW37 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-9A0A0A6YW37 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-9A0A0A6YW37 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.35■□□□□ 0.53
Ighv1-9A0A0A6YW37 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-9A0A0A6YW37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-9A0A0A6YW37 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-9A0A0A6YW37 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
Ighv1-9A0A0A6YW37 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-9A0A0A6YW37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-9A0A0A6YW37 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-9A0A0A6YW37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-9A0A0A6YW37 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-9A0A0A6YW37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ighv1-9A0A0A6YW37 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-9A0A0A6YW37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-9A0A0A6YW37 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-9A0A0A6YW37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-9A0A0A6YW37 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-9A0A0A6YW37 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-9A0A0A6YW37 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-9A0A0A6YW37 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-9A0A0A6YW37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-9A0A0A6YW37 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-9A0A0A6YW37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-9A0A0A6YW37 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
Ighv1-9A0A0A6YW37 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-9A0A0A6YW37 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-9A0A0A6YW37 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-9A0A0A6YW37 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-9A0A0A6YW37 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-9A0A0A6YW37 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-9A0A0A6YW37 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-9A0A0A6YW37 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-9A0A0A6YW37 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-9A0A0A6YW37 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-9A0A0A6YW37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-9A0A0A6YW37 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-9A0A0A6YW37 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-9A0A0A6YW37 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Ighv1-9A0A0A6YW37 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms