Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28897A0A087WP44 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28897A0A087WP44 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.66■■□□□ 1.06
Gm28897A0A087WP44 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28897A0A087WP44 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm28897A0A087WP44 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Gm28897A0A087WP44 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.64■■□□□ 1.05
Gm28897A0A087WP44 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28897A0A087WP44 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Gm28897A0A087WP44 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28897A0A087WP44 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28897A0A087WP44 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28897A0A087WP44 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28897A0A087WP44 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28897A0A087WP44 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28897A0A087WP44 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28897A0A087WP44 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.59■■□□□ 1.05
Gm28897A0A087WP44 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28897A0A087WP44 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28897A0A087WP44 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Gm28897A0A087WP44 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.58■■□□□ 1.05
Gm28897A0A087WP44 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28897A0A087WP44 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm28897A0A087WP44 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28897A0A087WP44 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gm28897A0A087WP44 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28897A0A087WP44 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Gm28897A0A087WP44 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm28897A0A087WP44 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm28897A0A087WP44 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Gm28897A0A087WP44 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm28897A0A087WP44 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm28897A0A087WP44 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28897A0A087WP44 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.51■■□□□ 1.03
Gm28897A0A087WP44 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28897A0A087WP44 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28897A0A087WP44 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28897A0A087WP44 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28897A0A087WP44 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28897A0A087WP44 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28897A0A087WP44 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28897A0A087WP44 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28897A0A087WP44 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28897A0A087WP44 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28897A0A087WP44 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.49■■□□□ 1.03
Gm28897A0A087WP44 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.49■■□□□ 1.03
Gm28897A0A087WP44 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Gm28897A0A087WP44 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm28897A0A087WP44 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Gm28897A0A087WP44 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28897A0A087WP44 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28897A0A087WP44 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Gm28897A0A087WP44 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm28897A0A087WP44 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.45■■□□□ 1.02
Gm28897A0A087WP44 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm28897A0A087WP44 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm28897A0A087WP44 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm28897A0A087WP44 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28897A0A087WP44 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
Gm28897A0A087WP44 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm28897A0A087WP44 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm28897A0A087WP44 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.41■■□□□ 1.02
Gm28897A0A087WP44 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm28897A0A087WP44 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Gm28897A0A087WP44 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gm28897A0A087WP44 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm28897A0A087WP44 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Gm28897A0A087WP44 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28897A0A087WP44 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm28897A0A087WP44 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28897A0A087WP44 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28897A0A087WP44 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm28897A0A087WP44 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.36■■□□□ 1.01
Gm28897A0A087WP44 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28897A0A087WP44 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28897A0A087WP44 Gm27322-201ENSMUST00000184007 104 ntBASIC21.33■■□□□ 1.01
Gm28897A0A087WP44 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28897A0A087WP44 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm28897A0A087WP44 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms