Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.06■□□□□ 0.8
Trav6d-5A0A075B6B9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-5A0A075B6B9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6d-5A0A075B6B9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6d-5A0A075B6B9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6d-5A0A075B6B9 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.02■□□□□ 0.8
Trav6d-5A0A075B6B9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav6d-5A0A075B6B9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trav6d-5A0A075B6B9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20■□□□□ 0.79
Trav6d-5A0A075B6B9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6d-5A0A075B6B9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6d-5A0A075B6B9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6d-5A0A075B6B9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6d-5A0A075B6B9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6d-5A0A075B6B9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6d-5A0A075B6B9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6d-5A0A075B6B9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6d-5A0A075B6B9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.97■□□□□ 0.79
Trav6d-5A0A075B6B9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trav6d-5A0A075B6B9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6d-5A0A075B6B9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6d-5A0A075B6B9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6d-5A0A075B6B9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trav6d-5A0A075B6B9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trav6d-5A0A075B6B9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6d-5A0A075B6B9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6d-5A0A075B6B9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav6d-5A0A075B6B9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6d-5A0A075B6B9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6d-5A0A075B6B9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6d-5A0A075B6B9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav6d-5A0A075B6B9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6d-5A0A075B6B9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-5A0A075B6B9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-5A0A075B6B9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-5A0A075B6B9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-5A0A075B6B9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6d-5A0A075B6B9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6d-5A0A075B6B9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6d-5A0A075B6B9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6d-5A0A075B6B9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6d-5A0A075B6B9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6d-5A0A075B6B9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6d-5A0A075B6B9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6d-5A0A075B6B9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trav6d-5A0A075B6B9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav6d-5A0A075B6B9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Trav6d-5A0A075B6B9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav6d-5A0A075B6B9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Trav6d-5A0A075B6B9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6d-5A0A075B6B9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav6d-5A0A075B6B9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6d-5A0A075B6B9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6d-5A0A075B6B9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6d-5A0A075B6B9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6d-5A0A075B6B9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6d-5A0A075B6B9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trav6d-5A0A075B6B9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6d-5A0A075B6B9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6d-5A0A075B6B9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Trav6d-5A0A075B6B9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6d-5A0A075B6B9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trav6d-5A0A075B6B9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav6d-5A0A075B6B9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6d-5A0A075B6B9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6d-5A0A075B6B9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6d-5A0A075B6B9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6d-5A0A075B6B9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6d-5A0A075B6B9 Gm25262-201ENSMUST00000174934 133 ntBASIC19.78■□□□□ 0.76
Trav6d-5A0A075B6B9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav6d-5A0A075B6B9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6d-5A0A075B6B9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav6d-5A0A075B6B9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6d-5A0A075B6B9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Trav6d-5A0A075B6B9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6d-5A0A075B6B9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav6d-5A0A075B6B9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trav6d-5A0A075B6B9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6d-5A0A075B6B9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Trav6d-5A0A075B6B9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
Trav6d-5A0A075B6B9 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.74■□□□□ 0.75
Trav6d-5A0A075B6B9 Gm27322-201ENSMUST00000184007 104 ntBASIC19.74■□□□□ 0.75
Trav6d-5A0A075B6B9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.74■□□□□ 0.75
Trav6d-5A0A075B6B9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6d-5A0A075B6B9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav6d-5A0A075B6B9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6d-5A0A075B6B9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6d-5A0A075B6B9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6d-5A0A075B6B9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms