Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav5-4A0A075B652 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav5-4A0A075B652 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trav5-4A0A075B652 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav5-4A0A075B652 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trav5-4A0A075B652 Amer2-203ENSMUST00000225247 2662 ntBASIC20.43■□□□□ 0.86
Trav5-4A0A075B652 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav5-4A0A075B652 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav5-4A0A075B652 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-4A0A075B652 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.4■□□□□ 0.86
Trav5-4A0A075B652 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-4A0A075B652 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav5-4A0A075B652 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav5-4A0A075B652 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav5-4A0A075B652 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav5-4A0A075B652 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trav5-4A0A075B652 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav5-4A0A075B652 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav5-4A0A075B652 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav5-4A0A075B652 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav5-4A0A075B652 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trav5-4A0A075B652 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav5-4A0A075B652 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav5-4A0A075B652 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav5-4A0A075B652 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav5-4A0A075B652 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trav5-4A0A075B652 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trav5-4A0A075B652 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav5-4A0A075B652 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav5-4A0A075B652 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav5-4A0A075B652 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav5-4A0A075B652 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav5-4A0A075B652 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trav5-4A0A075B652 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav5-4A0A075B652 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav5-4A0A075B652 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trav5-4A0A075B652 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav5-4A0A075B652 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav5-4A0A075B652 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav5-4A0A075B652 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Trav5-4A0A075B652 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav5-4A0A075B652 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav5-4A0A075B652 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav5-4A0A075B652 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.29■□□□□ 0.84
Trav5-4A0A075B652 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav5-4A0A075B652 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trav5-4A0A075B652 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav5-4A0A075B652 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav5-4A0A075B652 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav5-4A0A075B652 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
Trav5-4A0A075B652 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trav5-4A0A075B652 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trav5-4A0A075B652 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav5-4A0A075B652 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.26■□□□□ 0.83
Trav5-4A0A075B652 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.26■□□□□ 0.83
Trav5-4A0A075B652 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-4A0A075B652 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-4A0A075B652 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav5-4A0A075B652 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav5-4A0A075B652 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trav5-4A0A075B652 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav5-4A0A075B652 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Trav5-4A0A075B652 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-4A0A075B652 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.2■□□□□ 0.83
Trav5-4A0A075B652 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav5-4A0A075B652 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav5-4A0A075B652 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav5-4A0A075B652 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav5-4A0A075B652 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-4A0A075B652 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-4A0A075B652 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-4A0A075B652 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-4A0A075B652 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav5-4A0A075B652 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav5-4A0A075B652 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav5-4A0A075B652 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav5-4A0A075B652 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav5-4A0A075B652 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav5-4A0A075B652 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav5-4A0A075B652 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.15■□□□□ 0.82
Trav5-4A0A075B652 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.15■□□□□ 0.82
Trav5-4A0A075B652 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav5-4A0A075B652 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav5-4A0A075B652 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav5-4A0A075B652 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav5-4A0A075B652 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav5-4A0A075B652 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.13■□□□□ 0.81
Trav5-4A0A075B652 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav5-4A0A075B652 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav5-4A0A075B652 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.12■□□□□ 0.81
Trav5-4A0A075B652 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav5-4A0A075B652 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms