Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13-2A0A075B649 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13-2A0A075B649 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav13-2A0A075B649 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-2A0A075B649 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-2A0A075B649 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-2A0A075B649 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav13-2A0A075B649 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13-2A0A075B649 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13-2A0A075B649 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Trav13-2A0A075B649 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav13-2A0A075B649 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-2A0A075B649 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-2A0A075B649 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Trav13-2A0A075B649 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-2A0A075B649 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Trav13-2A0A075B649 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-2A0A075B649 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-2A0A075B649 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-2A0A075B649 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-2A0A075B649 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav13-2A0A075B649 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav13-2A0A075B649 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.34■□□□□ 0.21
Trav13-2A0A075B649 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-2A0A075B649 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-2A0A075B649 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-2A0A075B649 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-2A0A075B649 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-2A0A075B649 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-2A0A075B649 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-2A0A075B649 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav13-2A0A075B649 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-2A0A075B649 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-2A0A075B649 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav13-2A0A075B649 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-2A0A075B649 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-2A0A075B649 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav13-2A0A075B649 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.28■□□□□ 0.2
Trav13-2A0A075B649 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav13-2A0A075B649 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav13-2A0A075B649 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trav13-2A0A075B649 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-2A0A075B649 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-2A0A075B649 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-2A0A075B649 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13-2A0A075B649 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-2A0A075B649 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-2A0A075B649 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-2A0A075B649 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-2A0A075B649 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav13-2A0A075B649 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13-2A0A075B649 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-2A0A075B649 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-2A0A075B649 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-2A0A075B649 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-2A0A075B649 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav13-2A0A075B649 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-2A0A075B649 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-2A0A075B649 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-2A0A075B649 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-2A0A075B649 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav13-2A0A075B649 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.2■□□□□ 0.18
Trav13-2A0A075B649 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav13-2A0A075B649 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-2A0A075B649 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-2A0A075B649 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-2A0A075B649 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-2A0A075B649 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-2A0A075B649 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-2A0A075B649 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-2A0A075B649 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-2A0A075B649 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-2A0A075B649 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-2A0A075B649 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-2A0A075B649 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-2A0A075B649 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-2A0A075B649 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-2A0A075B649 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-2A0A075B649 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-2A0A075B649 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms