Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.9■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav15d-1-dv6d-1A0A075B624 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.87■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav15d-1-dv6d-1A0A075B624 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Peli2-204ENSMUST00000226513 1320 ntBASIC20.82■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.79■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.79■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.78■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav15d-1-dv6d-1A0A075B624 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav15d-1-dv6d-1A0A075B624 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trav15d-1-dv6d-1A0A075B624 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Gm26115-201ENSMUST00000175605 87 ntBASIC20.6■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav15d-1-dv6d-1A0A075B624 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Gm8109-201ENSMUST00000194076 746 ntBASIC20.57■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms