Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav10nA0A075B622 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav10nA0A075B622 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trav10nA0A075B622 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav10nA0A075B622 Zfp131-205ENSMUST00000223812 663 ntBASIC21.93■■□□□ 1.1
Trav10nA0A075B622 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav10nA0A075B622 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trav10nA0A075B622 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav10nA0A075B622 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav10nA0A075B622 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav10nA0A075B622 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trav10nA0A075B622 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trav10nA0A075B622 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav10nA0A075B622 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.88■■□□□ 1.09
Trav10nA0A075B622 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.88■■□□□ 1.09
Trav10nA0A075B622 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav10nA0A075B622 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trav10nA0A075B622 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trav10nA0A075B622 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trav10nA0A075B622 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.86■■□□□ 1.09
Trav10nA0A075B622 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav10nA0A075B622 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Trav10nA0A075B622 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav10nA0A075B622 Amer2-203ENSMUST00000225247 2662 ntBASIC21.84■■□□□ 1.09
Trav10nA0A075B622 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trav10nA0A075B622 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav10nA0A075B622 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav10nA0A075B622 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.83■■□□□ 1.09
Trav10nA0A075B622 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.83■■□□□ 1.08
Trav10nA0A075B622 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trav10nA0A075B622 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trav10nA0A075B622 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav10nA0A075B622 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trav10nA0A075B622 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Trav10nA0A075B622 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav10nA0A075B622 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Trav10nA0A075B622 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav10nA0A075B622 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.8■■□□□ 1.08
Trav10nA0A075B622 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav10nA0A075B622 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.79■■□□□ 1.08
Trav10nA0A075B622 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.78■■□□□ 1.08
Trav10nA0A075B622 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.78■■□□□ 1.08
Trav10nA0A075B622 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav10nA0A075B622 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav10nA0A075B622 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav10nA0A075B622 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav10nA0A075B622 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav10nA0A075B622 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav10nA0A075B622 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav10nA0A075B622 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.74■■□□□ 1.07
Trav10nA0A075B622 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav10nA0A075B622 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav10nA0A075B622 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav10nA0A075B622 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav10nA0A075B622 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav10nA0A075B622 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.72■■□□□ 1.07
Trav10nA0A075B622 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav10nA0A075B622 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.71■■□□□ 1.07
Trav10nA0A075B622 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav10nA0A075B622 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav10nA0A075B622 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav10nA0A075B622 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav10nA0A075B622 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav10nA0A075B622 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav10nA0A075B622 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav10nA0A075B622 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Trav10nA0A075B622 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav10nA0A075B622 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.66■■□□□ 1.06
Trav10nA0A075B622 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trav10nA0A075B622 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trav10nA0A075B622 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav10nA0A075B622 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.65■■□□□ 1.06
Trav10nA0A075B622 Gm9397-201ENSMUST00000200125 605 ntBASIC21.65■■□□□ 1.06
Trav10nA0A075B622 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trav10nA0A075B622 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trav10nA0A075B622 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav10nA0A075B622 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav10nA0A075B622 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav10nA0A075B622 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trav10nA0A075B622 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.62■■□□□ 1.05
Trav10nA0A075B622 Gm45855-201ENSMUST00000212546 880 ntBASIC21.62■■□□□ 1.05
Trav10nA0A075B622 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trav10nA0A075B622 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav10nA0A075B622 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav10nA0A075B622 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav10nA0A075B622 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.59■■□□□ 1.05
Trav10nA0A075B622 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trav10nA0A075B622 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.58■■□□□ 1.04
Trav10nA0A075B622 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.57■■□□□ 1.04
Trav10nA0A075B622 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Trav10nA0A075B622 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav10nA0A075B622 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav10nA0A075B622 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav10nA0A075B622 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trav10nA0A075B622 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms