Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 AC233702.5-201ENST00000584107 538 ntBASIC26■■□□□ 1.75
ARFGEF1Q9Y6D6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 SOX15-203ENST00000570788 1093 ntBASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 RN7SL471P-201ENST00000580476 299 ntBASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 AC100791.3-201ENST00000617619 330 ntBASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.99■■□□□ 1.75
ARFGEF1Q9Y6D6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 RPS2P55-201ENST00000397318 883 ntBASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 AC107956.1-201ENST00000494359 873 ntBASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ARFGEF1Q9Y6D6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 FAM21FP-204ENST00000608637 956 ntBASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ARFGEF1Q9Y6D6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ARFGEF1Q9Y6D6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 RN7SL850P-201ENST00000579959 291 ntBASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
ARFGEF1Q9Y6D6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ARFGEF1Q9Y6D6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.95■■□□□ 1.74
ARFGEF1Q9Y6D6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
ARFGEF1Q9Y6D6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.95■■□□□ 1.74
ARFGEF1Q9Y6D6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ARFGEF1Q9Y6D6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 AC133561.5-201ENST00000635547 218 ntBASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 AL049637.2-201ENST00000641778 930 ntBASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 AC093323.1-202ENST00000635031 2045 ntBASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
ARFGEF1Q9Y6D6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.93■■□□□ 1.74
ARFGEF1Q9Y6D6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms