Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 AC097658.1-201ENST00000475555 843 ntBASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 C9orf163-202ENST00000624034 2573 ntBASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC74BQ96LY2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 MYC-209ENST00000641252 345 ntBASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 AC010542.4-201ENST00000563151 1910 ntBASIC20.06■□□□□ 0.8
CCDC74BQ96LY2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 AC091874.3-201ENST00000512672 1195 ntBASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC74BQ96LY2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 AC245052.3-201ENST00000450182 901 ntBASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CCDC74BQ96LY2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 KRT18P29-201ENST00000397031 1267 ntBASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 ITM2C-210ENST00000620962 501 ntBASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC74BQ96LY2 C11orf96-202ENST00000528572 1834 ntBASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 AC091799.1-201ENST00000422823 811 ntBASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 AC008687.6-201ENST00000596318 630 ntBASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 FAM99A-202ENST00000538190 1989 ntBASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC74BQ96LY2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC74BQ96LY2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC74BQ96LY2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC74BQ96LY2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC74BQ96LY2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC74BQ96LY2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC74BQ96LY2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC74BQ96LY2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC74BQ96LY2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC74BQ96LY2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms