Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a6Q8C6K9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a6Q8C6K9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a6Q8C6K9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a6Q8C6K9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Col6a6Q8C6K9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.64■□□□□ 0.25
Col6a6Q8C6K9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col6a6Q8C6K9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a6Q8C6K9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms