Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tsen54Q8C2A2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Gm12821-201ENSMUST00000120022 600 ntBASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tsen54Q8C2A2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tsen54Q8C2A2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Tsen54Q8C2A2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.39■□□□□ 0.05
Tsen54Q8C2A2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms