Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trerf1Q8BXJ2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trerf1Q8BXJ2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trerf1Q8BXJ2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trerf1Q8BXJ2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trerf1Q8BXJ2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trerf1Q8BXJ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trerf1Q8BXJ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.29■□□□□ 0.68
Trerf1Q8BXJ2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trerf1Q8BXJ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms