Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.9■□□□□ 0.46
Cpsf4Q8BQZ5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf4Q8BQZ5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf4Q8BQZ5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf4Q8BQZ5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Gm37179-201ENSMUST00000194862 823 ntBASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4Q8BQZ5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4Q8BQZ5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4Q8BQZ5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Gm13146-201ENSMUST00000118508 780 ntBASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4Q8BQZ5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms