Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRTM4Q86VH4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRTM4Q86VH4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC090192.1-201ENST00000517740 490 ntBASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC010536.3-201ENST00000620306 533 ntBASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
LRRTM4Q86VH4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 CDCA4P2-201ENST00000441182 718 ntBASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRTM4Q86VH4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LRRTM4Q86VH4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRTM4Q86VH4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRTM4Q86VH4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LRRTM4Q86VH4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRTM4Q86VH4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 DUX4L16-201ENST00000555130 1264 ntBASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRTM4Q86VH4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 AC026185.1-201ENST00000445748 174 ntBASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRTM4Q86VH4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 RAP2CP1-201ENST00000605103 478 ntBASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 AC231657.2-201ENST00000624556 255 ntBASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRTM4Q86VH4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms